Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 RPL23AP7-203ENST00000449021 469 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 RPL23AP35-201ENST00000451906 501 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC055855.1-201ENST00000489563 579 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC134050.1-201ENST00000495088 933 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC121758.2-201ENST00000553271 193 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC106782.4-201ENST00000568264 210 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 MIR4509-3-201ENST00000578671 94 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC105245.1-201ENST00000581934 244 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 MIR4509-2-201ENST00000583920 94 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC002984.1-201ENST00000591692 448 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 BNIP3P23-201ENST00000599655 511 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC091152.3-201ENST00000604227 325 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AL592221.1-201ENST00000605266 382 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AL158042.1-201ENST00000605338 460 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC097468.3-201ENST00000607956 456 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AL157392.4-201ENST00000609756 345 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC097478.2-201ENST00000610572 514 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 uc_338.14-201ENST00000613162 166 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 MIR4509-1-201ENST00000618224 94 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 MIR6132-201ENST00000622083 109 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AL356596.1-201ENST00000624230 379 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AP001002.2-201ENST00000625137 386 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC093591.3-201ENST00000634516 308 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 MIR203B-201ENST00000636080 86 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AL359854.1-201ENST00000614203 1594 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 MTND4P9-201ENST00000507819 1346 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 FAM133CP-201ENST00000332869 704 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 RNU6-486P-201ENST00000363116 107 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 RNU6-1284P-201ENST00000363701 100 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 RNU5A-8P-201ENST00000364102 114 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 SNORA6-201ENST00000384033 151 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 MIR491-201ENST00000384877 84 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 MIR122-201ENST00000385044 85 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 NDUFS5P1-201ENST00000405668 289 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC107081.1-201ENST00000414975 361 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 NPM1P11-201ENST00000417106 855 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 EIF4EP4-201ENST00000424916 578 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC092648.1-201ENST00000425870 423 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AL445669.1-201ENST00000426743 755 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC108938.1-201ENST00000451204 136 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 KLF3P2-201ENST00000465138 268 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC072039.1-201ENST00000477611 581 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 RN7SL636P-201ENST00000497504 294 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 DEFB108A-201ENST00000530110 222 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 SNORD53-201ENST00000579969 78 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 MIR4293-201ENST00000584305 78 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 MIR5002-201ENST00000584713 97 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AL450336.1-201ENST00000605180 586 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 MIR6840-201ENST00000611937 71 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC009090.3-201ENST00000616553 565 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC006386.2-201ENST00000624491 75 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC012005.1-201ENST00000624575 75 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 PISRT1-201ENST00000626175 531 ntBASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLN6Q9NWW5 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 NACAP2-201ENST00000318548 624 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 HSPE1P11-201ENST00000339579 310 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CLN6Q9NWW5 AL355497.1-201ENST00000406262 551 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 U6atac.2-201ENST00000408644 118 ntBASIC1.96□□□□□ -2.1
CLN6Q9NWW5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms