Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNU2-52P-201ENST00000410680 190 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 RNA5SP184-201ENST00000411071 108 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX4Q9NQI0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.4□□□□□ -1.87
DDX4Q9NQI0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 MED13P1-201ENST00000428342 171 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 TXNP1-201ENST00000441872 371 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.4□□□□□ -1.87
DDX4Q9NQI0 KC877373.1-201ENST00000479066 408 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 HSPE1P6-201ENST00000479457 291 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX4Q9NQI0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX4Q9NQI0 MTND1P5-201ENST00000517906 940 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 AC090572.1-201ENST00000519251 160 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.4□□□□□ -1.87
DDX4Q9NQI0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX4Q9NQI0 BDH2P1-201ENST00000602288 736 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 AP002826.1-201ENST00000608835 315 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 CR381653.2-201ENST00000624041 768 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 LRRC77P-213ENST00000637727 880 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 OR5H6-203ENST00000642105 978 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 FAM35BP-202ENST00000497389 3337 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AL137003.2-201ENST00000606924 2538 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AL136360.1-201ENST00000503377 1900 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC073343.1-201ENST00000328239 651 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 Y_RNA.1-201ENST00000352915 104 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 RNA5SP126-201ENST00000365092 109 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 SNORA36C-201ENST00000384289 132 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AL360182.1-201ENST00000397433 468 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 RNA5SP274-201ENST00000410484 108 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 MRPL50P2-201ENST00000416821 482 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC008850.1-201ENST00000427546 362 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 RPL7L1P10-201ENST00000427790 463 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC002486.1-201ENST00000435098 391 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AL451074.3-201ENST00000437709 472 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC006539.3-201ENST00000454258 129 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 RN7SL633P-201ENST00000488974 297 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AL359273.1-201ENST00000510918 627 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AP003034.1-201ENST00000534621 422 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 SUB1P2-201ENST00000556401 297 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 GLUD1P4-201ENST00000590914 418 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC025165.5-201ENST00000602802 578 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC007619.2-201ENST00000605743 379 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC007684.1-201ENST00000609671 477 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC092794.1-201ENST00000612734 582 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 U6atac.1-201ENST00000616025 117 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC009161.2-201ENST00000624626 138 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 MIR6863-201ENST00000636112 90 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
DDX4Q9NQI0 AC004972.1-201ENST00000623934 2209 ntBASIC3.39□□□□□ -1.87
DDX4Q9NQI0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
DDX4Q9NQI0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.38□□□□□ -1.87
DDX4Q9NQI0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX4Q9NQI0 RNU6-282P-201ENST00000365357 103 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 RNU6-456P-201ENST00000384493 107 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 MIR558-201ENST00000384920 94 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.38□□□□□ -1.87
DDX4Q9NQI0 AC245291.1-201ENST00000419501 328 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 OR2AS1P-201ENST00000427827 319 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 RPS20P5-201ENST00000434808 360 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 MTND1P4-201ENST00000435196 415 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 RPL36AP6-201ENST00000435770 321 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX4Q9NQI0 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 AC010631.1-201ENST00000474150 156 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 RNU6-390P-201ENST00000516259 103 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 AP001893.2-201ENST00000526949 202 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 FAM92A1P1-201ENST00000528023 890 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX4Q9NQI0 AC107016.2-201ENST00000547968 190 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 AC124947.2-202ENST00000552735 133 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 AL035413.2-201ENST00000604801 525 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 AP002360.4-201ENST00000606980 481 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 AC010133.1-201ENST00000615809 842 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms