Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 SNORD62.1-201ENST00000362541 86 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 Y_RNA.556-201ENST00000384677 113 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 RNU6-823P-201ENST00000391042 103 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 RPS23P10-201ENST00000416185 486 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 AC243428.1-201ENST00000421099 264 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 MRPS18CP6-201ENST00000423587 223 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 RPS24P13-201ENST00000442520 397 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 AC026801.1-201ENST00000497178 464 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 VN1R104P-201ENST00000505115 1009 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 SLC25A15P5-201ENST00000508033 253 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 AC096745.1-201ENST00000509945 370 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 AC023141.12-201ENST00000512399 199 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 Y_RNA.668-201ENST00000516233 93 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 AC022655.2-201ENST00000577280 318 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 AC062037.2-201ENST00000610137 73 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 AL138721.1-201ENST00000616756 179 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 AL360181.4-201ENST00000621752 134 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 AC016588.2-201ENST00000632484 3021 ntBASIC4.35□□□□□ -1.71
RNF38Q9H0F5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF38Q9H0F5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 AC138393.1-203ENST00000327086 343 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 RNA5SP52-201ENST00000362448 134 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 RNA5SP189-201ENST00000364920 115 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 RNU1-115P-201ENST00000365329 160 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 Y_RNA.396-201ENST00000383949 103 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 RNU6-190P-201ENST00000384154 102 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 RNU6-1109P-201ENST00000391187 107 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 AC108032.1-201ENST00000416706 207 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 PPP1R11P2-201ENST00000423543 382 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 RPL23AP69-201ENST00000431134 458 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 CYCSP43-201ENST00000438233 310 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 MTND2P29-201ENST00000438595 412 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 AL162151.2-201ENST00000448875 158 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 snoU13.4-201ENST00000458916 104 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 AC012158.1-204ENST00000483430 465 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 AC026470.2-201ENST00000561492 181 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 AC007619.2-201ENST00000605743 379 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 AC078938.1-201ENST00000620993 318 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 MIR4275-201ENST00000636486 87 ntBASIC4.34□□□□□ -1.71
RNF38Q9H0F5 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF38Q9H0F5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RNF38Q9H0F5 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RNF38Q9H0F5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RNF38Q9H0F5 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 Y_RNA.210-201ENST00000364161 110 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 Y_RNA.257-201ENST00000364596 102 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 SNORA23-201ENST00000365128 182 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 RHOT1P2-201ENST00000366423 333 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 DEFB109C-201ENST00000382575 264 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 DEFB109B-201ENST00000382656 264 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 RNU6-1026P-201ENST00000384465 108 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 MIR93-201ENST00000385024 80 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 MIR607-201ENST00000385241 96 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 MIR134-201ENST00000385258 73 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 RPL21P65-201ENST00000406094 466 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 AL603908.1-201ENST00000406098 201 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 RNU6-628P-201ENST00000410675 107 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 RNA5SP104-201ENST00000410989 118 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 AC096664.2-201ENST00000411843 406 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 RPL21P66-201ENST00000426566 466 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 SUMO1P3-201ENST00000439961 304 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 RPL21P2-201ENST00000440049 481 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 AL353752.1-201ENST00000454946 260 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 RN7SL604P-201ENST00000492589 296 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 AC114801.2-201ENST00000503825 781 ntBASIC4.33□□□□□ -1.72
RNF38Q9H0F5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF38Q9H0F5 AC009901.1-201ENST00000506703 541 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms