Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AC087821.2-201ENST00000637086 450 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 MTND5P30-201ENST00000452896 1731 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 SNORA16B-201ENST00000364674 135 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNA5SP363-201ENST00000365072 115 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNU6-234P-201ENST00000365229 104 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNU6-1-201ENST00000383898 107 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNU6-42P-201ENST00000384165 107 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNU6-36P-201ENST00000384172 107 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNU6-4P-201ENST00000384205 107 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNU6-5P-201ENST00000384238 107 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNU6-3P-201ENST00000384314 107 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNU1-57P-201ENST00000384491 166 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNU6-2-201ENST00000384627 107 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNU6-9-201ENST00000384776 107 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNU6-33P-201ENST00000384793 107 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 TPMTP3-201ENST00000411928 735 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AC026801.1-201ENST00000497178 464 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 SNORA31.23-201ENST00000517219 133 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 SNORA31.25-201ENST00000517242 134 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 MIR3122-201ENST00000577243 73 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AC008121.1-201ENST00000603244 268 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AC011451.2-201ENST00000604303 598 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AL021997.1-201ENST00000605757 193 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 RNU6-6P-201ENST00000606623 107 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AP000238.1-201ENST00000608759 426 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 MIR6504-201ENST00000613520 61 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 AP002791.1-201ENST00000623291 381 ntBASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
UPF3BQ9BZI7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2□□□□□ -2.09
UPF3BQ9BZI7 AC010889.1-201ENST00000566193 2666 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
UPF3BQ9BZI7 RNU2-49P-201ENST00000410666 184 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 RNU2-68P-201ENST00000410878 191 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 USP9YP19-201ENST00000412165 485 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 TAF13P2-201ENST00000416876 286 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 USP9YP13-201ENST00000417797 480 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 BPY2DP-201ENST00000422208 265 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 AL358453.1-201ENST00000422522 250 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 RPS3AP44-201ENST00000425466 790 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 MED14P1-201ENST00000430517 648 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 RPL35AP22-201ENST00000436855 335 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 AL137159.1-201ENST00000452808 512 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2□□□□□ -2.09
UPF3BQ9BZI7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2□□□□□ -2.09
UPF3BQ9BZI7 RPL23AP41-201ENST00000484754 458 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 AC034222.1-201ENST00000494052 532 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2□□□□□ -2.09
UPF3BQ9BZI7 RNU2-19P-201ENST00000517288 84 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2□□□□□ -2.09
UPF3BQ9BZI7 AC087441.2-201ENST00000529141 262 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 AC069294.1-201ENST00000608397 350 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 AC002550.2-201ENST00000621246 394 ntBASIC2□□□□□ -2.09
UPF3BQ9BZI7 AC008555.8-201ENST00000623602 2168 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 RNU1-148P-201ENST00000384472 162 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 MIR613-201ENST00000385248 95 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AL627390.1-201ENST00000396055 340 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 CCNG1P1-201ENST00000406783 885 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 NDUFS5P4-201ENST00000412983 318 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AC092393.1-201ENST00000439625 742 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AL691517.1-201ENST00000440833 1235 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AL136380.1-201ENST00000447970 162 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 OFD1P3Y-201ENST00000453312 783 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AC079203.1-201ENST00000487972 404 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AC112518.2-201ENST00000508565 425 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 LTV1P1-201ENST00000510683 1237 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 MRPS17P9-201ENST00000511924 393 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AC118273.2-201ENST00000532092 465 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 NACAP3-201ENST00000552100 481 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AC090615.1-201ENST00000577519 154 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 MIR4637-201ENST00000582405 84 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 MIR3199-1-201ENST00000582434 88 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AC239868.4-201ENST00000608318 671 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AC025048.6-202ENST00000627667 438 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 AC110491.1-201ENST00000562191 2010 ntBASIC1.99□□□□□ -2.09
UPF3BQ9BZI7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms