Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 U8.21-201ENST00000459536 136 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 HMGB1P35-201ENST00000503360 598 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 HMGN1P11-201ENST00000508668 303 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 AC025465.3-201ENST00000510570 311 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-570P-201ENST00000517051 105 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 AC134698.5-201ENST00000519444 336 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 AC034114.1-201ENST00000520293 285 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 TRAV37-201ENST00000553906 342 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 CR381572.2-201ENST00000624852 397 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 A2MP1-204ENST00000566278 4130 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 RNU1-94P-201ENST00000362627 173 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-611P-201ENST00000384276 104 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-33P-201ENST00000384793 107 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 MIR195-201ENST00000385194 87 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 FAR2P2-201ENST00000413041 594 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AC114755.2-201ENST00000413520 361 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 Z85995.1-201ENST00000415547 335 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AL096701.2-201ENST00000416920 238 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AL158156.1-201ENST00000422509 473 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AC245028.1-201ENST00000423259 256 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 RPL21P91-201ENST00000429231 479 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 Y_RNA.673-201ENST00000516306 88 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-182P-201ENST00000516970 105 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 RNA5SP291-201ENST00000517222 105 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AC109329.1-201ENST00000518744 317 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AC091144.1-201ENST00000519573 138 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AP001880.2-201ENST00000538233 448 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 RRN3P3-201ENST00000549207 578 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 RPL21P7-201ENST00000557463 483 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 MIR4330-201ENST00000579077 105 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 RN7SL176P-201ENST00000580352 264 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AL512605.2-201ENST00000592972 256 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AL158827.2-201ENST00000602494 330 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AC008962.1-201ENST00000605729 304 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AL691447.3-201ENST00000635020 330 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 MAPK10-263ENST00000641052 4307 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 AL359693.1-201ENST00000614959 2407 ntBASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM56Q9BRZ2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
TRIM56Q9BRZ2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.65
TRIM56Q9BRZ2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.71□□□□□ -1.65
TRIM56Q9BRZ2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.71□□□□□ -1.65
TRIM56Q9BRZ2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 RPL9P7-201ENST00000330965 580 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 RNU1-76P-201ENST00000362903 159 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 Y_RNA.183-201ENST00000363882 113 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 SNORA7.2-201ENST00000364446 145 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 RNA5SP151-201ENST00000365632 117 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AL590139.1-201ENST00000416267 400 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 MTND5P15-201ENST00000434246 349 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AC092573.2-201ENST00000434546 243 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AL513043.1-201ENST00000439124 535 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AC009220.1-201ENST00000451614 275 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 snoU13.4-201ENST00000458916 104 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 RPL9P9-202ENST00000466501 579 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AC006463.2-201ENST00000473326 348 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 RPL21P13-201ENST00000488305 481 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 SCARNA22-201ENST00000503991 125 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 AC007016.1-201ENST00000512110 244 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 RNU6-138P-201ENST00000515952 107 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 RNU1-86P-201ENST00000516108 154 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 RNU1-107P-201ENST00000516617 154 ntBASIC4.71□□□□□ -1.66
TRIM56Q9BRZ2 Y_RNA.700-201ENST00000516806 100 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms