Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RPS27AP10-201ENST00000496103 208 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AC009901.1-201ENST00000506703 541 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AC119751.5-201ENST00000514077 770 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 RN7SKP282-201ENST00000516824 299 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 RNU2-46P-201ENST00000517038 113 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.26□□□□□ -1.89
SDF4Q9BRK5 NACAP3-201ENST00000552100 481 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.26□□□□□ -1.89
SDF4Q9BRK5 MIR3682-201ENST00000581338 84 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 AC005498.1-201ENST00000592125 465 ntBASIC3.26□□□□□ -1.89
SDF4Q9BRK5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SDF4Q9BRK5 ELF2P3-201ENST00000445099 1506 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 CR848007.1-201ENST00000442354 1699 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 U8.3-201ENST00000363321 132 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 SNORA5B-201ENST00000363786 132 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 RNU6-946P-201ENST00000383878 107 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 AL590004.2-201ENST00000404787 371 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 AC098831.1-201ENST00000440661 216 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 MTND4P25-201ENST00000441039 533 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 NIPA2P5-201ENST00000452282 464 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 RPL23AP11-201ENST00000475260 469 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 RAP1BP2-201ENST00000478270 544 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 HIGD1AP13-201ENST00000509878 289 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 RNU6-677P-201ENST00000516914 101 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 RNU6-703P-201ENST00000516946 107 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 AC005771.1-201ENST00000585581 349 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 ELOCP29-201ENST00000588193 334 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 AC010620.2-201ENST00000600135 313 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 AC024153.1-201ENST00000603103 365 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 BNIP3P9-201ENST00000603714 553 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 AL355598.1-201ENST00000604169 202 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 MIR3974-201ENST00000637126 96 ntBASIC3.25□□□□□ -1.89
SDF4Q9BRK5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SDF4Q9BRK5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SDF4Q9BRK5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SDF4Q9BRK5 ASNSP3-201ENST00000451989 1306 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SDF4Q9BRK5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.24□□□□□ -1.89
SDF4Q9BRK5 U3.4-201ENST00000363352 213 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 RNU6-288P-201ENST00000363690 104 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AC023141.4-201ENST00000412031 328 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 ELOCP4-201ENST00000420090 333 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AC090960.1-201ENST00000421072 306 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AC007283.2-201ENST00000424739 197 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AC098614.2-201ENST00000426040 255 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AL358075.3-201ENST00000426289 226 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 RPS15AP5-201ENST00000436276 388 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AC007182.2-201ENST00000489251 402 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AC113155.1-201ENST00000511141 769 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AC010486.3-201ENST00000511602 785 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AC091826.1-201ENST00000514065 313 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 HMGB1P41-201ENST00000520234 440 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AL590229.1-201ENST00000603497 542 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AL035413.2-201ENST00000604801 525 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AP001506.1-201ENST00000615444 211 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SDF4Q9BRK5 UCA1.1-201ENST00000620952 75 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SDF4Q9BRK5 AC110491.1-201ENST00000562191 2010 ntBASIC3.24□□□□□ -1.89
SDF4Q9BRK5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 OR5J1P-201ENST00000313544 939 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 RNU6-188P-201ENST00000364207 107 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 SNORD21-201ENST00000383953 95 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 SNORA18.3-201ENST00000384122 132 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 SNORA40.3-201ENST00000390964 122 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 RPS3AP36-201ENST00000398190 775 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AC093106.2-201ENST00000428212 385 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 SETP8-201ENST00000435341 628 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 RPL36AP6-201ENST00000435770 321 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 RPS15AP27-201ENST00000449183 343 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 MTATP6P7-201ENST00000453315 681 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AC126182.1-201ENST00000478134 357 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms