Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.89□□□□□ -2.11
VAT1Q99536 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.89□□□□□ -2.11
VAT1Q99536 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.89□□□□□ -2.11
VAT1Q99536 MTATP6P30-201ENST00000443540 664 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 TRBV12-1-201ENST00000479785 344 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 AC068781.1-201ENST00000488231 618 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 AC007182.2-201ENST00000489251 402 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 RPS29P21-201ENST00000496272 170 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 AC113347.3-201ENST00000509113 148 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 AC008837.2-201ENST00000513076 418 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 RNU6-927P-201ENST00000516199 100 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 RNU7-193P-201ENST00000516723 65 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.89□□□□□ -2.11
VAT1Q99536 CYCSP26-201ENST00000534107 320 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.89□□□□□ -2.11
VAT1Q99536 VN1R83P-201ENST00000595685 445 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 AC004987.4-201ENST00000603383 338 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.89□□□□□ -2.11
VAT1Q99536 AL121652.1-201ENST00000608851 448 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 AC010678.1-201ENST00000614118 713 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.89□□□□□ -2.11
VAT1Q99536 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.89□□□□□ -2.11
VAT1Q99536 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
VAT1Q99536 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.88□□□□□ -2.11
VAT1Q99536 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 SNORA16B-201ENST00000364674 135 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 RNU6-744P-201ENST00000365557 107 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 RNU6-1316P-201ENST00000384242 108 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.88□□□□□ -2.11
VAT1Q99536 RPL30P4-201ENST00000429309 333 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.88□□□□□ -2.11
VAT1Q99536 AL451074.3-201ENST00000437709 472 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 RPL23AP76-201ENST00000441860 458 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 MTCO3P45-201ENST00000443036 613 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.88□□□□□ -2.11
VAT1Q99536 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.88□□□□□ -2.11
VAT1Q99536 AC013267.1-201ENST00000458227 267 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC080013.2-201ENST00000460866 323 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VAT1Q99536 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.88□□□□□ -2.11
VAT1Q99536 MTND5P13-201ENST00000513046 1079 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.88□□□□□ -2.11
VAT1Q99536 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.88□□□□□ -2.11
VAT1Q99536 AC021451.1-201ENST00000523498 1129 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC023538.1-201ENST00000534576 736 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 ANP32BP3-201ENST00000559213 706 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC021739.1-201ENST00000559631 174 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.88□□□□□ -2.11
VAT1Q99536 MTND3P13-201ENST00000574391 343 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.88□□□□□ -2.11
VAT1Q99536 AC068620.3-201ENST00000602749 560 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC112220.2-201ENST00000605513 533 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC107214.2-201ENST00000608204 634 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC087241.4-201ENST00000612441 480 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC098657.3-201ENST00000620434 263 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AP002791.1-201ENST00000623291 381 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC007490.1-201ENST00000624321 703 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 PISRT1-201ENST00000626175 531 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AC025048.6-202ENST00000627667 438 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 AL390862.1-201ENST00000635467 1469 ntBASIC1.88□□□□□ -2.11
VAT1Q99536 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VAT1Q99536 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.87□□□□□ -2.11
VAT1Q99536 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VAT1Q99536 RNU6-289P-201ENST00000364093 107 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
VAT1Q99536 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VAT1Q99536 AL139397.2-201ENST00000404529 772 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 GSTA9P-201ENST00000406231 611 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 RNU4-26P-201ENST00000410270 107 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.87□□□□□ -2.11
VAT1Q99536 AC003685.2-201ENST00000422795 395 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 GTF2IP3-201ENST00000433887 494 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 AC020550.1-201ENST00000447385 163 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.87□□□□□ -2.11
VAT1Q99536 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.87□□□□□ -2.11
VAT1Q99536 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.87□□□□□ -2.11
VAT1Q99536 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.87□□□□□ -2.11
VAT1Q99536 AC079203.1-201ENST00000487972 404 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 AC092436.1-201ENST00000506450 503 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 SUMO2P5-201ENST00000506790 245 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.87□□□□□ -2.11
VAT1Q99536 AC110760.3-202ENST00000515177 371 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 RNU1-41P-201ENST00000516161 162 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 RNU6-390P-201ENST00000516259 103 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 RNU1-48P-201ENST00000516400 162 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 RNA5SP165-201ENST00000517142 115 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
VAT1Q99536 AL049838.1-201ENST00000563647 981 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.87□□□□□ -2.11
VAT1Q99536 AC069294.1-201ENST00000608397 350 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 AL161423.1-201ENST00000613700 262 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 AC123767.1-202ENST00000620407 817 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 OR1S1-201ENST00000624470 978 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 AC079416.3-201ENST00000624479 549 ntBASIC1.87□□□□□ -2.11
VAT1Q99536 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
VAT1Q99536 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.86□□□□□ -2.11
VAT1Q99536 HSPA8P4-201ENST00000511877 1920 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms