Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MIR767-201ENST00000390228 109 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 RNA5SP354-201ENST00000391247 136 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 SNORA3.3-201ENST00000408712 125 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 RNU6-628P-201ENST00000410675 107 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 RNU4-46P-201ENST00000410818 138 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 MTCYBP5-201ENST00000423752 1135 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 MTCO3P30-201ENST00000426425 670 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 C4BPAP2-201ENST00000428434 478 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AC009220.1-201ENST00000451614 275 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 MTATP6P7-201ENST00000453315 681 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AL162395.1-201ENST00000457882 422 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 RPL36AP51-201ENST00000487216 318 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AC139453.3-201ENST00000493276 369 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 RN7SKP122-201ENST00000515923 296 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 RNU6-314P-201ENST00000516574 104 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 MIR4703-201ENST00000577728 79 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 MIR548AC-201ENST00000585049 88 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 HMGN2P15-201ENST00000585707 270 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AC017083.3-201ENST00000609955 700 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AC084782.3-201ENST00000612282 578 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 U6.42-201ENST00000618440 107 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AL359880.1-201ENST00000621879 266 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 AC090617.7-201ENST00000623952 126 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 MAPK10-322ENST00000641485 4530 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 MTND4P14-201ENST00000435799 1354 ntBASIC3.15□□□□□ -1.9
NR1H4Q96RI1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NR1H4Q96RI1 OR4G2P-201ENST00000328113 903 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 Y_RNA.3-201ENST00000362331 103 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 Y_RNA.41-201ENST00000362646 102 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 RNU6-778P-201ENST00000363269 103 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 RNU6-1322P-201ENST00000364309 107 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 RNU6-1215P-201ENST00000384441 102 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 MIR141-201ENST00000384975 95 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 RNU2-29P-201ENST00000410423 189 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC098614.2-201ENST00000426040 255 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 BRK1P2-201ENST00000442875 223 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 GMFBP1-201ENST00000467831 427 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC117522.3-201ENST00000507974 584 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 RN7SKP43-201ENST00000516173 320 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 PSMA2P1-201ENST00000526365 646 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC103843.2-201ENST00000530523 682 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 MIR4782-201ENST00000577987 79 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 MIR5692A1-201ENST00000580523 69 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC012119.1-201ENST00000603184 222 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC012468.1-201ENST00000604888 430 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC122108.2-201ENST00000611946 526 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 MIR6875-201ENST00000617506 72 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 FP236240.3-201ENST00000623061 327 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 U2.21-201ENST00000637295 81 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 CKAP2P1-201ENST00000555477 2049 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC091564.4-201ENST00000533934 2194 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AC008669.1-201ENST00000565823 2178 ntBASIC3.15□□□□□ -1.91
NR1H4Q96RI1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NR1H4Q96RI1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NR1H4Q96RI1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NR1H4Q96RI1 AC110491.1-201ENST00000562191 2010 ntBASIC3.14□□□□□ -1.91
NR1H4Q96RI1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NR1H4Q96RI1 NACAP2-201ENST00000318548 624 ntBASIC3.14□□□□□ -1.91
NR1H4Q96RI1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.14□□□□□ -1.91
NR1H4Q96RI1 RNU6-517P-201ENST00000384362 110 ntBASIC3.14□□□□□ -1.91
NR1H4Q96RI1 RNU1-13P-201ENST00000384499 162 ntBASIC3.14□□□□□ -1.91
NR1H4Q96RI1 RNU6-550P-201ENST00000391057 101 ntBASIC3.14□□□□□ -1.91
NR1H4Q96RI1 AL139039.1-201ENST00000401900 692 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms