Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SNORD9-201ENST00000362566 104 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.58-201ENST00000362807 102 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.126-201ENST00000363382 111 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.154-201ENST00000363624 102 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.301-201ENST00000364990 103 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 RNY3P1-201ENST00000365085 102 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 RNU6-715P-201ENST00000365204 103 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 RNY3-201ENST00000365484 102 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 XGY1-201ENST00000381172 446 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.490-201ENST00000384413 102 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 RNU6-393P-201ENST00000384475 107 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 RNA5SP219-201ENST00000390940 113 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 SNORA16.2-201ENST00000390991 127 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 SNORA57.1-201ENST00000391227 145 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 BX682237.1-201ENST00000415016 335 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AC016831.2-201ENST00000417179 352 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AL160275.3-201ENST00000423876 471 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 FTH1P6-201ENST00000430768 320 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 snoU13.4-201ENST00000458916 104 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 DYNLL1P5-201ENST00000467158 270 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 RN7SL594P-201ENST00000470590 287 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 MTCO1P29-201ENST00000496868 288 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 TRBVA-201ENST00000498804 316 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AC090136.1-201ENST00000520009 240 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AP000889.2-201ENST00000532684 490 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 HPRT1P3-201ENST00000539521 576 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AC090115.3-201ENST00000553218 849 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 MIR3921-201ENST00000577308 85 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AP001330.4-201ENST00000604350 154 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 U2.17-201ENST00000611454 95 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AL355810.1-201ENST00000614629 552 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AC034102.8-201ENST00000615146 484 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 AC007742.2-201ENST00000618226 398 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.64□□□□□ -1.83
ATG4AQ8WYN0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.67-201ENST00000362870 100 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 AL133412.1-201ENST00000380194 2992 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 RNU6-434P-201ENST00000384376 107 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 AL139039.1-201ENST00000401900 692 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 AL139397.2-201ENST00000404529 772 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 FAT1P1-201ENST00000406588 507 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 RNA5SP239-201ENST00000410218 129 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 RNU6-55P-201ENST00000411092 107 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 RNU6-954P-201ENST00000411355 107 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 RPL7P10-201ENST00000417407 739 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 AL669831.1-202ENST00000428504 417 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 GTF2IP13-201ENST00000438487 386 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 TXNP1-201ENST00000441872 371 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 AC008264.1-201ENST00000447612 367 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 RPS3AP46-201ENST00000448352 682 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 RPS4XP2-201ENST00000458402 793 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 AC087588.1-201ENST00000462203 316 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 UBE2CP3-201ENST00000502715 450 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 RANP9-201ENST00000519957 271 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 MTCO3P23-201ENST00000561363 289 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 MIR3942-201ENST00000585264 109 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 MIR15A-201ENST00000607334 83 ntBASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4AQ8WYN0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AC010733.2-201ENST00000589496 5702 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AL590704.1-201ENST00000402856 794 ntBASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4AQ8WYN0 AL159169.1-201ENST00000421119 127 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms