Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC063944.3-201ENST00000609969 533 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AC006329.2-201ENST00000611491 394 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AC021755.4-201ENST00000616620 456 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AC007490.1-201ENST00000624321 703 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AL159972.1-201ENST00000625150 448 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 KPNA2P1-201ENST00000458289 1591 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AL390862.1-201ENST00000635467 1469 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 SNORD56.5-201ENST00000364281 72 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 RNU1-109P-201ENST00000383960 147 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 MTCYBP3-201ENST00000445588 1137 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC010285.1-201ENST00000470580 392 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC010625.1-201ENST00000511296 403 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 MTND3P12-201ENST00000559068 328 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC110588.1-201ENST00000559699 137 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC079248.2-201ENST00000623779 326 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 RNU6-50P-201ENST00000362356 103 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 MTATP6P27-201ENST00000416987 621 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 SNRPEP7-201ENST00000438350 220 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 OR6K5P-201ENST00000447050 945 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 RPL30P6-201ENST00000475925 342 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 RNU6-583P-201ENST00000516012 92 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 RNU6-150P-201ENST00000516237 95 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC008015.1-201ENST00000555505 465 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 ACTR3BP3-201ENST00000565577 979 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC140725.3-201ENST00000616193 880 ntBASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.89□□□□□ -2.11
SHROOM3Q8TF72 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 RNA5SP393-201ENST00000363423 117 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 RNA5SP190-201ENST00000365222 118 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 RNU6-1207P-201ENST00000384343 107 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 RNY1P14-201ENST00000384426 108 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 HMGB1P17-201ENST00000403495 628 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 TXNP7-201ENST00000406296 293 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 RNU6-757P-201ENST00000410334 100 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 RNU6-920P-201ENST00000410926 92 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 HMGB3P2-201ENST00000411913 584 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 TOMM22P1-201ENST00000418578 312 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 THAP5P1-201ENST00000439089 262 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 AL606662.1-201ENST00000445763 553 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 MTCO1P27-201ENST00000448269 226 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 NCOR1P1-202ENST00000486162 291 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 MTCYBP43-201ENST00000513621 740 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 AL669831.4-202ENST00000590817 238 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 AL607023.1-201ENST00000620045 248 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 AC007494.3-201ENST00000624660 743 ntBASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.88□□□□□ -2.11
SHROOM3Q8TF72 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC119751.3-201ENST00000399720 670 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC234781.2-201ENST00000426370 994 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 MTND5P14-201ENST00000441481 1267 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC118469.1-201ENST00000442943 488 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms