Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL139811.1-201ENST00000424779 2299 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 SNORA20.1-201ENST00000364790 130 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 RNU6-384P-201ENST00000364900 104 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 RNU6-1074P-201ENST00000383995 104 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 RNU6-1093P-201ENST00000391194 107 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 SAR1AP2-201ENST00000392696 594 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 RPS20P14-201ENST00000412545 360 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 USP9YP7-201ENST00000436723 430 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 USP9YP32-201ENST00000452432 430 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 MTND4LP30-201ENST00000454092 297 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 RPL7P5-201ENST00000471472 736 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AC008897.1-201ENST00000494006 347 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 HMGB3P17-201ENST00000504195 649 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 FTH1P9-201ENST00000513251 355 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 SNORA40.15-201ENST00000516884 107 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 RNU4-60P-201ENST00000517239 135 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AC144568.1-201ENST00000520139 137 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AC100770.1-201ENST00000532310 322 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AC022968.1-201ENST00000567372 442 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AC107294.1-201ENST00000609524 467 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 MIR6780A-201ENST00000615089 68 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AL138721.1-201ENST00000616756 179 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AC130454.1-201ENST00000622948 401 ntBASIC4.16□□□□□ -1.74
NUP43Q8NFH3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP43Q8NFH3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NUP43Q8NFH3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
NUP43Q8NFH3 AC027290.2-201ENST00000623210 18662 ntBASIC4.15□□□□□ -1.74
NUP43Q8NFH3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
NUP43Q8NFH3 RNU6-395P-201ENST00000365662 106 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 MIR301A-201ENST00000385261 86 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AL096701.2-201ENST00000416920 238 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 RPL7AP25-201ENST00000423357 805 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 MTCO1P39-201ENST00000426148 480 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 DNAJC19P7-201ENST00000428811 344 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AC073264.2-201ENST00000448886 166 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 RNU6-1037P-201ENST00000459571 107 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AC025465.3-201ENST00000510570 311 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 RN7SKP40-201ENST00000517211 242 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 MIR5696-201ENST00000578474 85 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AL512605.2-201ENST00000592972 256 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AL390123.1-201ENST00000603216 237 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AC008745.1-201ENST00000604064 271 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AL161798.1-201ENST00000604630 131 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AC099669.2-201ENST00000616549 437 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 U6.104-201ENST00000637979 90 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 ZNF299P-201ENST00000406845 1804 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 SDAD1P2-201ENST00000441308 2028 ntBASIC4.15□□□□□ -1.75
NUP43Q8NFH3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.15□□□□□ -1.75
NUP43Q8NFH3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 AC022893.2-201ENST00000564832 3296 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUP43Q8NFH3 MFSD8-216ENST00000641147 4009 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 Y_RNA.33-201ENST00000362591 102 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 RNU5A-1-201ENST00000362698 116 ntBASIC4.14□□□□□ -1.75
NUP43Q8NFH3 Y_RNA.105-201ENST00000363182 111 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms