Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SYNPOQ8N3V7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SYNPOQ8N3V7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 MIR208A-201ENST00000362287 71 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 RNA5SP119-201ENST00000362715 117 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 Y_RNA.384-201ENST00000383909 102 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 RNU6-214P-201ENST00000384130 107 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 SNORD66.1-201ENST00000391230 76 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 AP000567.1-201ENST00000406413 156 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 SNORA57.3-201ENST00000411095 141 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 HLA-N-201ENST00000437516 135 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 HMGB3P8-201ENST00000449709 577 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 AC092798.1-201ENST00000458542 409 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 AC006499.6-201ENST00000511169 607 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 SNORA25.17-201ENST00000517184 124 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 AC011602.1-201ENST00000546484 331 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 H3F3AP1-201ENST00000559984 334 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 MTND4LP5-201ENST00000605152 292 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 AC005344.1-201ENST00000613391 459 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 AC009233.1-201ENST00000616477 371 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 AC068831.7-201ENST00000616954 363 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SYNPOQ8N3V7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 SNORA63.1-201ENST00000362493 131 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 Y_RNA.813-201ENST00000364639 102 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 RNU6-1035P-201ENST00000384477 107 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 RNU2-3P-201ENST00000410144 191 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 AL592148.1-201ENST00000413568 445 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 CYCSP33-201ENST00000414485 327 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 AL353729.1-201ENST00000425044 720 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 RPL23AP83-201ENST00000434984 473 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 SNORA71B-202ENST00000439232 272 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 AC006011.1-201ENST00000442758 349 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 AL590664.1-201ENST00000448065 339 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 AL451050.1-201ENST00000450126 415 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 PRSS3P4-201ENST00000453323 162 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 snoU109.2-201ENST00000459316 135 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 RNU7-138P-201ENST00000459479 64 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 RPL21P13-201ENST00000488305 481 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 COPS8P3-201ENST00000526024 482 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 MIR3609-201ENST00000582661 80 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 AC007938.3-201ENST00000604965 623 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 FAM157A-202ENST00000615155 405 ntBASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNPOQ8N3V7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SYNPOQ8N3V7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SYNPOQ8N3V7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SYNPOQ8N3V7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 MIR448-201ENST00000362131 111 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 Y_RNA.11-201ENST00000362375 109 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 RNU6-562P-201ENST00000362731 107 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 Y_RNA.212-201ENST00000364177 102 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 MIR34A-201ENST00000385130 110 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 SNORA40C-201ENST00000391285 128 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 RAB9AP3-201ENST00000412737 573 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 AC074085.1-201ENST00000413598 418 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 AC098614.2-201ENST00000426040 255 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 YME1L1P1-201ENST00000429435 297 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 AL627311.1-201ENST00000431514 115 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 MYL8P-204ENST00000431574 518 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 RPL37P4-201ENST00000448908 268 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 RAB9AP1-201ENST00000449393 573 ntBASIC4.15□□□□□ -1.75
SYNPOQ8N3V7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms