Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 RN7SKP227-201ENST00000364445 330 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 RNA5SP283-201ENST00000365604 119 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 RNU6-213P-201ENST00000384051 104 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 RNU6-332P-201ENST00000391193 108 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AL590004.1-201ENST00000405321 300 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 SNORA3.3-201ENST00000408712 125 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 RNU6-193P-201ENST00000410977 107 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 OR9R1P-201ENST00000412200 877 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 SETP5-201ENST00000437270 562 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AC008264.1-201ENST00000447612 367 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 HMGB3P8-201ENST00000449709 577 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 SCARNA18-201ENST00000459004 134 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 RPL21P41-201ENST00000459863 264 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 RN7SL132P-201ENST00000478131 296 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AP003122.3-201ENST00000526316 255 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 PSMA2P1-201ENST00000526365 646 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AC084851.1-201ENST00000529105 249 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AP000867.2-201ENST00000532468 320 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 CYCSP30-201ENST00000546447 172 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AMZ2P1-203ENST00000565833 850 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 RPS3AP23-202ENST00000574601 686 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 MIR3671-201ENST00000580455 88 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AL355598.1-201ENST00000604169 202 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AL137849.1-201ENST00000604767 169 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AL138880.2-201ENST00000616214 239 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 AP003122.6-201ENST00000623831 495 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 RNA5SP196-201ENST00000625967 102 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 U6.98-201ENST00000637157 84 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 OR4G1P-203ENST00000641984 1631 ntBASIC3.69□□□□□ -1.82
KRT78Q8N1N4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT78Q8N1N4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 FRG1CP-201ENST00000358464 769 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 RNU6-373P-201ENST00000411247 98 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 RPL37P4-201ENST00000448908 268 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 AL136097.1-201ENST00000456945 913 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 AC092798.1-201ENST00000458542 409 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 snoU13.28-201ENST00000459235 104 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 RPL23AP11-201ENST00000475260 469 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 RPL38P4-201ENST00000502376 214 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 AC104136.1-201ENST00000512969 394 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 RNU6-711P-201ENST00000517255 106 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 NARSP2-201ENST00000518524 679 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 SUB1P1-201ENST00000524415 382 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 AF235103.2-201ENST00000525753 346 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 MIR4697-201ENST00000582977 78 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 Y_RNA.812-201ENST00000610788 101 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 MIR486-1-201ENST00000612171 68 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 Y_RNA.784-201ENST00000613803 101 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 AC009233.1-201ENST00000616477 371 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 Y_RNA.787-201ENST00000616522 101 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 Y_RNA.780-201ENST00000617336 101 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 Y_RNA.801-201ENST00000619005 101 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 AC090574.1-201ENST00000623186 233 ntBASIC3.68□□□□□ -1.82
KRT78Q8N1N4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.68□□□□□ -1.82
KRT78Q8N1N4 U6.99-201ENST00000637524 83 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms