Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC098614.2-201ENST00000426040 255 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 RPS29P27-201ENST00000463711 170 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 AL137100.2-201ENST00000555786 315 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.08□□□□□ -1.6
SIX5Q8N196 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.08□□□□□ -1.6
SIX5Q8N196 Y_RNA.772-201ENST00000606692 102 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX5Q8N196 AC090132.2-201ENST00000615881 347 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 SCARNA4-202ENST00000625402 129 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX5Q8N196 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX5Q8N196 U6.92-201ENST00000636464 89 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX5Q8N196 U6.99-201ENST00000637524 83 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX5Q8N196 AL022322.2-201ENST00000624072 20397 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SIX5Q8N196 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SIX5Q8N196 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SIX5Q8N196 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX5Q8N196 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.07□□□□□ -1.6
SIX5Q8N196 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SIX5Q8N196 RNU6-336P-201ENST00000364891 107 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 Y_RNA.352-201ENST00000365439 102 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 Y_RNA.785-201ENST00000384290 109 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SIX5Q8N196 MIR548M-201ENST00000408260 86 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 SNORA77-201ENST00000408716 125 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 ELOCP19-201ENST00000411919 318 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 TOMM22P1-201ENST00000418578 312 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.07□□□□□ -1.6
SIX5Q8N196 AL732292.1-201ENST00000426692 226 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.07□□□□□ -1.6
SIX5Q8N196 ISCUP1-201ENST00000454451 448 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 snoU109.2-201ENST00000459316 135 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 AC010469.2-201ENST00000496412 480 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 HMGB1P22-201ENST00000505315 124 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 RNA5SP464-201ENST00000516251 108 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 SNORA81.3-201ENST00000517283 198 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 DEFB108E-201ENST00000524692 240 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 AC108738.1-201ENST00000603703 237 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 AC009779.6-201ENST00000603972 165 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 AC099506.2-201ENST00000623074 221 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 AC090617.7-201ENST00000623952 126 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 U4.7-201ENST00000638126 106 ntBASIC5.07□□□□□ -1.6
SIX5Q8N196 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
SIX5Q8N196 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SIX5Q8N196 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SIX5Q8N196 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX5Q8N196 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SIX5Q8N196 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.06□□□□□ -1.6
SIX5Q8N196 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.06□□□□□ -1.6
SIX5Q8N196 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX5Q8N196 SNORD81.1-201ENST00000363064 77 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 RNA5SP515-201ENST00000364570 118 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 SNORA70.6-201ENST00000383934 134 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 RNY3P4-201ENST00000384428 101 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 MIR23B-201ENST00000384832 97 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 MIR215-201ENST00000384858 110 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 MIR129-1-201ENST00000384972 72 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SIX5Q8N196 SNORA57.1-201ENST00000391227 145 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 RPL21P40-201ENST00000428586 483 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.06□□□□□ -1.6
SIX5Q8N196 RPL23AP22-201ENST00000437556 453 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 PRELID3BP1-201ENST00000457142 540 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 RPL23AP56-201ENST00000460778 453 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.06□□□□□ -1.6
SIX5Q8N196 AC010618.1-201ENST00000469924 477 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 ANXA2P1-201ENST00000505539 926 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.06□□□□□ -1.6
SIX5Q8N196 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SIX5Q8N196 AC022868.1-201ENST00000517767 391 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 TRAV28-201ENST00000557548 323 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 AL512605.2-201ENST00000592972 256 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 AL139124.1-201ENST00000609123 421 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX5Q8N196 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX5Q8N196 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SIX5Q8N196 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX5Q8N196 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX5Q8N196 ABCC13-202ENST00000463099 3842 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.06□□□□□ -1.6
SIX5Q8N196 AC008568.2-201ENST00000623862 2313 ntBASIC5.06□□□□□ -1.6
SIX5Q8N196 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX5Q8N196 LINC02555-201ENST00000563933 1951 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SIX5Q8N196 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SIX5Q8N196 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SIX5Q8N196 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SIX5Q8N196 ADAM5-202ENST00000399789 1942 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SIX5Q8N196 LINC01109-201ENST00000603837 3081 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 RNU6-78P-201ENST00000362897 107 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 RNU6-280P-201ENST00000364145 104 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SIX5Q8N196 SNORA2.3-201ENST00000383920 135 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms