Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AP001372.4-201ENST00000524889 472 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 ATP5F1P5-201ENST00000526403 760 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AL512310.1-201ENST00000548639 172 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC009063.1-201ENST00000563342 702 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AGGF1P5-201ENST00000567900 919 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 LRRC37A5P-203ENST00000580181 585 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 MTND4LP5-201ENST00000605152 292 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 AC005332.10-201ENST00000612725 619 ntBASIC2.42□□□□□ -2.02
CCDC65Q8IXS2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 HMGB1P11-201ENST00000413899 637 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC005005.2-201ENST00000420779 380 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 HMGN2P38-201ENST00000423806 265 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 MTND1P20-201ENST00000430341 950 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 DPPA3P1-201ENST00000448050 469 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 UBE2DNL-203ENST00000474922 222 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC079804.2-201ENST00000490376 200 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC106872.3-201ENST00000495104 446 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 MIR514B-201ENST00000516774 80 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 MRPS36P3-201ENST00000519284 130 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC013828.2-201ENST00000532487 235 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AP002770.2-201ENST00000543613 532 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC002545.1-201ENST00000592511 181 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 BNIP3P40-201ENST00000596017 556 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC144521.1-201ENST00000607148 956 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC007038.2-201ENST00000608095 740 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 U2.21-201ENST00000637295 81 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AL109809.4-201ENST00000603520 2185 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 AC092125.1-201ENST00000562568 1995 ntBASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC65Q8IXS2 ZNF720P1-201ENST00000562403 1939 ntBASIC2.4□□□□□ -2.02
CCDC65Q8IXS2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC65Q8IXS2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.4□□□□□ -2.02
CCDC65Q8IXS2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AL391994.1-201ENST00000254724 282 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 RNU6-884P-201ENST00000363889 107 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC078974.1-201ENST00000411597 223 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 RPL21P24-201ENST00000413752 448 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AL035407.1-201ENST00000429211 571 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 USP12PX-201ENST00000432383 1057 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 GPM6BP3-201ENST00000442797 145 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 MTND4LP3-201ENST00000468320 276 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AL160314.1-201ENST00000490836 438 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC022493.1-201ENST00000492984 337 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC090255.1-201ENST00000495779 349 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC114786.4-201ENST00000508771 728 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 MRPS36P2-201ENST00000512569 299 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC114797.1-201ENST00000514003 728 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC110760.3-202ENST00000515177 371 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AP004247.1-201ENST00000531556 1289 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AL359212.1-201ENST00000556608 614 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC026464.5-201ENST00000562497 722 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AL138976.2-201ENST00000563989 694 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 AC239868.4-201ENST00000608318 671 ntBASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC65Q8IXS2 ZNF658B-202ENST00000615961 3375 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 MIR888-201ENST00000401186 77 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AL359634.1-202ENST00000404721 284 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 SNORD23.1-201ENST00000408212 104 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 AL356379.1-201ENST00000414105 126 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 USP9YP13-201ENST00000417797 480 ntBASIC2.39□□□□□ -2.03
CCDC65Q8IXS2 HMGB1P49-201ENST00000418882 569 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms