Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC069240.1-201ENST00000548774 375 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC025884.1-201ENST00000556034 378 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC109446.1-201ENST00000566172 220 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC092447.9-201ENST00000603395 144 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC098826.3-201ENST00000603823 466 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC104695.3-201ENST00000604052 296 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AL591034.3-201ENST00000605511 685 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 RNA5SP108-201ENST00000605921 117 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC005344.1-201ENST00000613391 459 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 Y_RNA.47-201ENST00000362697 108 ntBASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 Y_RNA.48-201ENST00000362710 103 ntBASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 Y_RNA.324-201ENST00000365165 102 ntBASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 Y_RNA.645-201ENST00000391229 102 ntBASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 SNORD66.1-201ENST00000391230 76 ntBASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 AC096664.2-201ENST00000411843 406 ntBASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 SYF2P2-201ENST00000417620 583 ntBASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 RNU1-86P-201ENST00000516108 154 ntBASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 RNU1-107P-201ENST00000516617 154 ntBASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-264P-201ENST00000517134 104 ntBASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 LRRC37A5P-203ENST00000580181 585 ntBASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 AC112484.5-201ENST00000624189 228 ntBASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM48Q8IWZ4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 SPRR2C-201ENST00000290702 219 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-1167P-201ENST00000363227 94 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 SNORD74.4-201ENST00000364129 80 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 MIR1193-201ENST00000408109 78 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-55P-201ENST00000411092 107 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AL353621.1-201ENST00000418219 243 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 MRPS18CP6-201ENST00000423587 223 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 UBE2D3P2-201ENST00000424409 445 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AL353748.1-201ENST00000440753 474 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 PCMTD1P1-201ENST00000455560 355 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC087588.1-201ENST00000462203 316 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC008571.1-201ENST00000467232 300 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC128713.1-201ENST00000471495 306 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC068781.1-201ENST00000488231 618 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 HMGB1P30-201ENST00000492455 606 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC015911.1-201ENST00000495111 156 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 OR8R1P-201ENST00000543943 764 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC091516.1-201ENST00000549191 703 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 SNRPGP15-201ENST00000600149 222 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 7SK.7-201ENST00000603504 247 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AL161798.1-201ENST00000604630 131 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC123912.5-201ENST00000605470 343 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC090425.1-201ENST00000610007 140 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 MIR492-201ENST00000638676 116 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC091812.1-201ENST00000432235 1948 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 AC004925.1-201ENST00000624256 2706 ntBASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.1□□□□□ -1.75
TRIM48Q8IWZ4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms