Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 SNORA70B-201ENST00000384210 135 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 MIR888-201ENST00000401186 77 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 MIR1261-201ENST00000408659 82 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 RNU6-757P-201ENST00000410334 100 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AC007919.1-201ENST00000429380 217 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 TXNL1P1-201ENST00000429528 554 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AL117351.1-201ENST00000438864 766 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AP000542.1-201ENST00000448473 371 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 RPL26P9-201ENST00000457466 433 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 MRPS17P3-201ENST00000465453 385 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AC022493.1-201ENST00000492984 337 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 MTCYBP43-201ENST00000513621 740 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 RNU1-41P-201ENST00000516161 162 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 RNU1-48P-201ENST00000516400 162 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 RNU7-193P-201ENST00000516723 65 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 MIR514B-201ENST00000516774 80 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 SCARNA1-201ENST00000517138 166 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AL049838.1-201ENST00000563647 981 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AC087241.4-201ENST00000612441 480 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AL136981.2-201ENST00000617319 734 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AL138713.1-201ENST00000624026 2130 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 OR4G3P-201ENST00000633500 913 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 MTND1P37-201ENST00000636562 264 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 AC099063.3-201ENST00000642066 185 ntBASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 RNU6-462P-201ENST00000362659 105 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 SNORA16B-201ENST00000364674 135 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 MIR17-201ENST00000385012 84 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 SNORA46.1-201ENST00000391069 153 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 RNU6-754P-201ENST00000391166 107 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 MTCO1P17-201ENST00000411522 491 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 MTND1P21-201ENST00000412991 285 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AL135786.1-201ENST00000415892 214 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AL121890.1-201ENST00000435457 205 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 RPS15AP5-201ENST00000436276 388 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AC090515.1-201ENST00000465295 476 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 RNA5SP216-201ENST00000516111 123 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 NRON-201ENST00000517270 370 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 HMGN1P28-201ENST00000521340 364 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 UBE2L4-201ENST00000587688 464 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 VN1R82P-201ENST00000601481 356 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AL357094.1-201ENST00000603845 844 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AC025588.2-201ENST00000604851 466 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AL139344.1-201ENST00000605228 195 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AC007349.4-201ENST00000608114 532 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AC016597.2-201ENST00000613256 341 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AL158801.5-201ENST00000623123 465 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 MTND4P1-201ENST00000457501 1466 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 AL109809.4-201ENST00000603520 2185 ntBASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDKL3Q8IVW4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 RNU6-432P-201ENST00000384196 109 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 RNU6-140P-201ENST00000384566 108 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 AL590084.2-201ENST00000401481 382 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 PIGPP2-201ENST00000411569 458 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 EIF4EP4-201ENST00000424916 578 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 AC079804.2-201ENST00000490376 200 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 AC105252.1-201ENST00000503089 286 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 AC091951.3-201ENST00000504093 246 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 AC008549.1-201ENST00000512900 643 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 AC022447.1-201ENST00000515358 464 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 RNU5F-8P-201ENST00000515941 111 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 AC002545.1-201ENST00000592511 181 ntBASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.11□□□□□ -2.07
CDKL3Q8IVW4 AC092953.2-201ENST00000608000 699 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 1250.6 ms