Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.08□□□□□ -1.92
PRPF39Q86UA1 CR848007.1-201ENST00000442354 1699 ntBASIC3.08□□□□□ -1.92
PRPF39Q86UA1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.07□□□□□ -1.92
PRPF39Q86UA1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PRPF39Q86UA1 RNU6-778P-201ENST00000363269 103 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 SNORA20.2-201ENST00000383922 131 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 MIR301A-201ENST00000385261 86 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.07□□□□□ -1.92
PRPF39Q86UA1 BPY2DP-201ENST00000422208 265 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.07□□□□□ -1.92
PRPF39Q86UA1 RPS24P1-201ENST00000438550 371 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 MTND6P13-201ENST00000443510 523 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.07□□□□□ -1.92
PRPF39Q86UA1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.07□□□□□ -1.92
PRPF39Q86UA1 AP004217.1-201ENST00000480579 346 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 AC096576.1-201ENST00000489014 359 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 AC139453.3-201ENST00000493276 369 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 RNU6-56P-201ENST00000516986 93 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.07□□□□□ -1.92
PRPF39Q86UA1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.07□□□□□ -1.92
PRPF39Q86UA1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.07□□□□□ -1.92
PRPF39Q86UA1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.07□□□□□ -1.92
PRPF39Q86UA1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.07□□□□□ -1.92
PRPF39Q86UA1 AL590229.1-201ENST00000603497 542 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 AC022893.3-201ENST00000607665 437 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 AC008147.4-201ENST00000617570 1204 ntBASIC3.07□□□□□ -1.92
PRPF39Q86UA1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 FGF7P2-201ENST00000332473 296 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 RNU4-1-201ENST00000363925 141 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 RNU6-641P-201ENST00000384006 107 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 SNORD116-8-201ENST00000384365 95 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 RPS3AP36-201ENST00000398190 775 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC023141.4-201ENST00000412031 328 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC104332.2-201ENST00000429959 156 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 RPL23AP30-201ENST00000432419 501 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 RN7SL633P-201ENST00000488974 297 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC007182.2-201ENST00000489251 402 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC113155.1-201ENST00000511141 769 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 RNU2-46P-201ENST00000517038 113 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC005771.1-201ENST00000585581 349 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 CLIC4P2-201ENST00000601934 717 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC012119.1-201ENST00000603184 222 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC174048.1-201ENST00000603389 144 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AL158032.1-201ENST00000605401 106 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AL161734.1-201ENST00000609720 557 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AC073114.1-201ENST00000612027 490 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 U2.21-201ENST00000637295 81 ntBASIC3.06□□□□□ -1.92
PRPF39Q86UA1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.06□□□□□ -1.92
PRPF39Q86UA1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 U3.4-201ENST00000363352 213 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 MIR181B1-201ENST00000385240 110 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 SNORA11.2-201ENST00000408318 127 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 EEF1A1P41-201ENST00000414667 207 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AC093151.1-201ENST00000427711 313 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AC107083.1-201ENST00000439643 279 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AC098831.1-201ENST00000440661 216 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 UBBP3-201ENST00000445497 241 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 RNA5SP269-201ENST00000459032 137 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AC117440.1-201ENST00000474107 571 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 Y_RNA.689-201ENST00000516589 107 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 Vault.3-201ENST00000516676 95 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AC024619.4-201ENST00000580924 316 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 SEPT7P9-203ENST00000604116 343 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AP001506.1-201ENST00000615444 211 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PRPF39Q86UA1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 AC026241.1-201ENST00000517873 2142 ntBASIC3.05□□□□□ -1.92
PRPF39Q86UA1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AL035425.3-201ENST00000564206 4996 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 NACAP2-201ENST00000318548 624 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 RNU6-39P-201ENST00000384344 107 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms