Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC022690.1-201ENST00000526681 550 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC044792.1-201ENST00000593294 196 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 RMST_8.1-201ENST00000610287 165 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 RNVU1-4-201ENST00000612985 164 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 AC025034.2-201ENST00000623264 286 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 MTND4P23-201ENST00000447723 1363 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 MTND4P35-201ENST00000604257 1375 ntBASIC4.09□□□□□ -1.75
UBE3BQ7Z3V4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
UBE3BQ7Z3V4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
UBE3BQ7Z3V4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
UBE3BQ7Z3V4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
UBE3BQ7Z3V4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 Y_RNA.100-201ENST00000363141 102 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 U3.12-201ENST00000364498 214 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 SNORA51.2-201ENST00000364595 132 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 SNORD37.1-201ENST00000390968 65 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 MIR1183-201ENST00000408856 89 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 RNA5SP229-201ENST00000410809 99 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 MTND3P8-201ENST00000412909 339 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC114491.1-201ENST00000416095 246 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 GABPAP-201ENST00000419271 1356 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AL353678.1-201ENST00000422735 741 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 RAC1P6-201ENST00000423911 575 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC090774.1-201ENST00000435925 246 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 IFNA20P-201ENST00000436840 528 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC006026.1-201ENST00000444025 1803 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC109925.1-201ENST00000478069 331 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 RN7SL432P-201ENST00000484057 298 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC006445.1-201ENST00000491925 405 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 RNA5SP309-201ENST00000516670 106 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 RNU7-30P-201ENST00000516835 62 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC105029.1-201ENST00000520250 669 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC125611.2-201ENST00000551907 647 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC017071.1-201ENST00000564407 2204 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AL670379.6-201ENST00000603753 252 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AL670379.11-201ENST00000604059 253 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC008162.1-201ENST00000604718 254 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AL670379.1-201ENST00000604752 252 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AL670379.5-201ENST00000605253 252 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AL670379.12-201ENST00000605291 253 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AL160281.1-201ENST00000605307 311 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AL670379.8-201ENST00000605353 252 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AL670379.7-201ENST00000605823 252 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 uc_338.5-201ENST00000611839 155 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 uc_338.1-201ENST00000612113 180 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AL157817.1-201ENST00000614264 790 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC004696.1-201ENST00000614345 607 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AL450472.3-201ENST00000615578 367 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 SNORD39.4-201ENST00000620099 78 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC005858.4-201ENST00000623191 700 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 AC103710.2-202ENST00000641454 2853 ntBASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3BQ7Z3V4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 RNU6-522P-201ENST00000364497 107 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 XGY1-201ENST00000381172 446 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AL606923.1-201ENST00000406616 190 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 RNU2-43P-201ENST00000410306 190 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 Y_RNA.615-201ENST00000410769 117 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 RNU4-47P-201ENST00000410876 114 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 RNU6-387P-201ENST00000411331 105 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 OR6C66P-201ENST00000414917 930 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 PPP1R11P2-201ENST00000423543 382 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 MRPL50P4-201ENST00000446432 475 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AL162395.1-201ENST00000457882 422 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AC007547.1-201ENST00000462177 490 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 RN7SL863P-201ENST00000462370 296 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AC004801.2-202ENST00000463559 283 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 AC010631.1-201ENST00000474150 156 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 RPS29P2-201ENST00000479278 136 ntBASIC4.07□□□□□ -1.76
UBE3BQ7Z3V4 RPL21P99-201ENST00000480369 423 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms