Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.11□□□□□ -1.91
PACS1Q6VY07 RPL39P40-201ENST00000445481 146 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 UBBP3-201ENST00000445497 241 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.11□□□□□ -1.91
PACS1Q6VY07 AC023194.1-201ENST00000493084 308 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.11□□□□□ -1.91
PACS1Q6VY07 SNORA70.16-201ENST00000516390 95 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 RNU7-51P-201ENST00000516560 62 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 MTND1P5-201ENST00000517906 940 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.11□□□□□ -1.91
PACS1Q6VY07 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.11□□□□□ -1.91
PACS1Q6VY07 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.11□□□□□ -1.91
PACS1Q6VY07 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.11□□□□□ -1.91
PACS1Q6VY07 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.11□□□□□ -1.91
PACS1Q6VY07 MIR3944-201ENST00000581277 108 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 AC098848.2-201ENST00000588023 330 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 BNIP3P22-201ENST00000593399 556 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 SRGNP1-201ENST00000603392 451 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 AP002360.4-201ENST00000606980 481 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 AC069234.5-201ENST00000611056 416 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 CR381653.2-201ENST00000624041 768 ntBASIC3.11□□□□□ -1.91
PACS1Q6VY07 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PACS1Q6VY07 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.11□□□□□ -1.91
PACS1Q6VY07 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
PACS1Q6VY07 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.11□□□□□ -1.91
PACS1Q6VY07 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.11□□□□□ -1.91
PACS1Q6VY07 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PACS1Q6VY07 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PACS1Q6VY07 DEFB108F-201ENST00000344638 222 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 Y_RNA.381-201ENST00000365666 102 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 MIR514A1-201ENST00000385133 98 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PACS1Q6VY07 RNU2-9P-201ENST00000410194 145 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 FCF1P9-201ENST00000412546 282 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 AL353193.1-201ENST00000421444 268 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 AL353678.1-201ENST00000422735 741 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.1□□□□□ -1.91
PACS1Q6VY07 USP12PX-201ENST00000432383 1057 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.1□□□□□ -1.91
PACS1Q6VY07 RN7SL20P-201ENST00000488827 297 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PACS1Q6VY07 AL359273.1-201ENST00000510918 627 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.1□□□□□ -1.91
PACS1Q6VY07 RN7SKP43-201ENST00000516173 320 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.1□□□□□ -1.91
PACS1Q6VY07 AC093012.1-202ENST00000549403 582 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.1□□□□□ -1.91
PACS1Q6VY07 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.1□□□□□ -1.91
PACS1Q6VY07 AC025449.1-201ENST00000603896 529 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 AL359198.2-201ENST00000611836 194 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 AL589994.2-201ENST00000621124 579 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 AL359880.1-201ENST00000621879 266 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 AC018692.3-201ENST00000623929 123 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 MIR4275-201ENST00000636486 87 ntBASIC3.1□□□□□ -1.91
PACS1Q6VY07 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
PACS1Q6VY07 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PACS1Q6VY07 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PACS1Q6VY07 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.1□□□□□ -1.91
PACS1Q6VY07 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PACS1Q6VY07 Y_RNA.367-201ENST00000365544 101 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 RNU6-108P-201ENST00000365558 107 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 SMIM11P1-201ENST00000369586 178 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 RNU6-641P-201ENST00000384006 107 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 RNU6-74P-201ENST00000384235 107 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 MIR493-201ENST00000385254 89 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 FO393413.1-201ENST00000402892 195 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PACS1Q6VY07 NDUFS5P1-201ENST00000405668 289 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 FAT1P1-201ENST00000406588 507 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 RN7SKP140-201ENST00000411196 284 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 BX682237.1-201ENST00000415016 335 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 MTATP6P18-201ENST00000417994 673 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PACS1Q6VY07 PSPHP1-201ENST00000450062 261 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 AC093899.1-201ENST00000457984 376 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 SNORD97-201ENST00000459187 142 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 RPL7P49-201ENST00000471402 708 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 AC026427.2-201ENST00000506228 536 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 RNU6-1092P-201ENST00000516955 87 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 RNU6-410P-201ENST00000517006 107 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 AP003072.2-201ENST00000527756 676 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.09□□□□□ -1.91
PACS1Q6VY07 AL355836.1-201ENST00000555951 870 ntBASIC3.09□□□□□ -1.91
PACS1Q6VY07 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms