Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 FRG2DP-202ENST00000566967 323 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 MIR3171-201ENST00000584270 74 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 SNRPGP17-201ENST00000603780 214 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 DPPA3P3-201ENST00000603842 430 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 AC012443.1-201ENST00000605605 231 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 AC116312.1-201ENST00000606841 314 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 AL022345.1-201ENST00000607292 135 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 AC092807.2-201ENST00000609367 243 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 AL359757.2-201ENST00000624309 274 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AC244517.1-201ENST00000606030 2086 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.216-201ENST00000364205 93 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 SNORA63C-201ENST00000364578 129 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.315-201ENST00000365117 102 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.530-201ENST00000384587 101 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 RNU6-278P-201ENST00000390945 109 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 RNU6-754P-201ENST00000391166 107 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 MIR548P-201ENST00000408336 84 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 RNA5SP31-201ENST00000411144 127 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 GOT2P5-201ENST00000433995 546 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AC236972.2-201ENST00000434979 310 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 GTF2IP13-201ENST00000438487 386 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 RPL23AP67-201ENST00000465341 474 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AP000926.1-201ENST00000479573 241 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AC083904.1-201ENST00000487828 231 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 SLC25A15P5-201ENST00000508033 253 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AC005741.1-201ENST00000511094 432 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.718-201ENST00000517110 102 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 DEFB108D-201ENST00000527787 222 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AL670379.11-201ENST00000604059 253 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AL670379.10-201ENST00000604330 253 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AL670379.12-201ENST00000605291 253 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AL670379.9-201ENST00000605428 253 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AL627309.6-201ENST00000606857 840 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 AC093838.1-201ENST00000613014 469 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 uc_338.15-201ENST00000615470 191 ntBASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF549Q6P9A3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ZNF549Q6P9A3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
ZNF549Q6P9A3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.34□□□□□ -1.88
ZNF549Q6P9A3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
ZNF549Q6P9A3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.34□□□□□ -1.88
ZNF549Q6P9A3 AC121333.1-201ENST00000567488 2709 ntBASIC3.34□□□□□ -1.88
ZNF549Q6P9A3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
ZNF549Q6P9A3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 RNU6-179P-201ENST00000363350 107 ntBASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 RNU6-960P-201ENST00000364056 120 ntBASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 RNA5SP56-201ENST00000410277 118 ntBASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 AC092447.6-201ENST00000414578 210 ntBASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 OR6C66P-201ENST00000414917 930 ntBASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 VN1R36P-201ENST00000414936 291 ntBASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 AC093106.2-201ENST00000428212 385 ntBASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 RPL36AP6-201ENST00000435770 321 ntBASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 RPL23AP33-201ENST00000442301 452 ntBASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 BRK1P2-201ENST00000442875 223 ntBASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF549Q6P9A3 RNU7-152P-201ENST00000458982 64 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms