Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 MIR6076-201ENST00000617521 113 ntBASIC3.21□□□□□ -1.9
HIST2H2BCQ6DN03 MIR7154-201ENST00000620673 73 ntBASIC3.21□□□□□ -1.9
HIST2H2BCQ6DN03 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.21□□□□□ -1.9
HIST2H2BCQ6DN03 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HIST2H2BCQ6DN03 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST2H2BCQ6DN03 FAM35BP-202ENST00000497389 3337 ntBASIC3.21□□□□□ -1.9
HIST2H2BCQ6DN03 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HIST2H2BCQ6DN03 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 Y_RNA.326-201ENST00000365176 113 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 RNU6-1227P-201ENST00000383981 107 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 MIR3074-201ENST00000384885 81 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 U3.19-201ENST00000390893 196 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 RNU2-29P-201ENST00000410423 189 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 RNA5SP104-201ENST00000410989 118 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 MRPL50P2-201ENST00000416821 482 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 RPL23AP30-201ENST00000432419 501 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 BNIP3P2-201ENST00000441221 577 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 RPL31P60-201ENST00000478450 367 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 RNU6-327P-201ENST00000516270 127 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AF235103.2-201ENST00000525753 346 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC093027.1-201ENST00000546698 429 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AL121821.2-201ENST00000556081 394 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC025678.1-201ENST00000567861 338 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 MIR5680-201ENST00000577577 84 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AL360085.1-201ENST00000604713 532 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC007619.2-201ENST00000605743 379 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC064801.1-201ENST00000612025 407 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 ATP5A1P2-202ENST00000616464 443 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC009233.1-201ENST00000616477 371 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AL589994.2-201ENST00000621124 579 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC079684.1-201ENST00000621405 437 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AC025034.2-201ENST00000623264 286 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AP003122.6-201ENST00000623831 495 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 MIR1321-201ENST00000637766 79 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 ZNF826P-207ENST00000622273 1910 ntBASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HIST2H2BCQ6DN03 AF127577.6-201ENST00000623352 2191 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 RNU6-1167P-201ENST00000363227 94 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 Y_RNA.394-201ENST00000383942 103 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 SNORA24.1-201ENST00000384401 135 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 MIR1-2-201ENST00000384961 85 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 MIR1183-201ENST00000408856 89 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 RNU4-46P-201ENST00000410818 138 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 UBE2D3P2-201ENST00000424409 445 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 SETP5-201ENST00000437270 562 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 RNU7-63P-201ENST00000459054 62 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 RPL7P42-201ENST00000481005 679 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 AC097462.2-201ENST00000504623 481 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 AC108078.2-201ENST00000510750 236 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 RNU6-237P-201ENST00000515985 71 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 AC090151.1-201ENST00000520784 730 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 AC022690.1-201ENST00000526681 550 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 HPRT1P3-201ENST00000539521 576 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 AL050343.2-201ENST00000607338 280 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 AC012409.4-201ENST00000612923 249 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 AC002076.2-201ENST00000617362 122 ntBASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST2H2BCQ6DN03 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms