Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF43Q68DV7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF43Q68DV7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF43Q68DV7 RNY1P5-201ENST00000383890 115 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 SNORD51-201ENST00000384320 80 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 MIR659-201ENST00000384963 97 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 BX842559.1-201ENST00000419615 532 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AC007098.1-201ENST00000420122 367 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AL451062.2-201ENST00000427515 271 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 CEACAMP1-201ENST00000434624 1035 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AL162389.1-201ENST00000449233 177 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AL513124.1-201ENST00000450410 614 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 VN1R105P-201ENST00000486595 910 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 RPS23P5-201ENST00000495419 428 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AL359273.1-201ENST00000510918 627 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AC113155.1-201ENST00000511141 769 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AC090151.1-201ENST00000520784 730 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AP001781.1-201ENST00000530977 207 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF43Q68DV7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 AC034105.4-201ENST00000568304 277 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 OR1M4P-201ENST00000589199 287 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AC007566.2-201ENST00000603642 413 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 MIR376A1-201ENST00000616574 68 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 FP236240.3-201ENST00000623061 327 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF43Q68DV7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF43Q68DV7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF43Q68DV7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF43Q68DV7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF43Q68DV7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF43Q68DV7 AC010329.2-201ENST00000595195 2737 ntBASIC4.74□□□□□ -1.65
RNF43Q68DV7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF43Q68DV7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF43Q68DV7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
RNF43Q68DV7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF43Q68DV7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF43Q68DV7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF43Q68DV7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF43Q68DV7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF43Q68DV7 RNU6-858P-201ENST00000362436 107 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 RNU6-371P-201ENST00000364283 108 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 RNU6-81P-201ENST00000365608 104 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 RNU6-1027P-201ENST00000383998 107 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 AL590704.1-201ENST00000402856 794 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 RPL21P90-201ENST00000415692 466 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF43Q68DV7 RPL23AP33-201ENST00000442301 452 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 AL354710.1-201ENST00000453641 246 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 ISCUP1-201ENST00000454451 448 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 AC012158.1-204ENST00000483430 465 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 RPL30P11-201ENST00000495304 339 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF43Q68DV7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF43Q68DV7 SNORA31.9-201ENST00000516429 84 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 RN7SKP60-201ENST00000516985 239 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 AC136932.1-201ENST00000574771 208 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 MIR5701-3-201ENST00000578890 82 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 MIR4429-201ENST00000580105 73 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 MIR4300-201ENST00000581016 96 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 MIR5701-1-201ENST00000585138 82 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 ARF4P1-201ENST00000605447 541 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 MIR5701-2-201ENST00000615634 82 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF43Q68DV7 AP001148.1-201ENST00000624124 2359 ntBASIC4.73□□□□□ -1.65
RNF43Q68DV7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF43Q68DV7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF43Q68DV7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF43Q68DV7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 AL391684.1-202ENST00000641293 1636 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF43Q68DV7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF43Q68DV7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF43Q68DV7 NOL8P1-201ENST00000508336 3529 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 MIR448-201ENST00000362131 111 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 RNA5SP52-201ENST00000362448 134 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 Y_RNA.541-201ENST00000384640 113 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 Z98745.1-201ENST00000402553 494 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 RPL23AP24-201ENST00000458203 385 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 RPL21P41-201ENST00000459863 264 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms