Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
RIF1Q5UIP0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.55□□□□□ -2.32
RIF1Q5UIP0 MTATP6P22-201ENST00000507369 598 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 RNA5SP134-201ENST00000516492 96 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 SNORA31.25-201ENST00000517242 134 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 AC007834.2-201ENST00000536310 343 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.55□□□□□ -2.32
RIF1Q5UIP0 FAM106CP-201ENST00000582212 507 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 AC008739.2-201ENST00000597006 317 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.55□□□□□ -2.32
RIF1Q5UIP0 AC005332.10-201ENST00000612725 619 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
RIF1Q5UIP0 CBX3P1-201ENST00000325243 554 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.55□□□□□ -2.32
RIF1Q5UIP0 RPL17P49-201ENST00000443728 411 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 SUMO2P2-201ENST00000456482 255 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 snoU109.1-201ENST00000459339 135 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.55□□□□□ -2.32
RIF1Q5UIP0 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.55□□□□□ -2.32
RIF1Q5UIP0 CBX3P3-201ENST00000508108 532 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 RNU1-61P-201ENST00000516107 151 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 RNA5SP471-201ENST00000516971 106 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 COX6CP3-201ENST00000580869 223 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 AL050343.2-201ENST00000607338 280 ntBASIC0.55□□□□□ -2.32
RIF1Q5UIP0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.54□□□□□ -2.32
RIF1Q5UIP0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.54□□□□□ -2.32
RIF1Q5UIP0 RPL31P60-201ENST00000478450 367 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 RNU6-970P-201ENST00000516312 107 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 OR5B19P-201ENST00000531766 928 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 RSL24D1P11-201ENST00000591045 491 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.54□□□□□ -2.32
RIF1Q5UIP0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
RIF1Q5UIP0 AP000776.1-201ENST00000530032 1663 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.54□□□□□ -2.32
RIF1Q5UIP0 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.54□□□□□ -2.32
RIF1Q5UIP0 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 Z80107.1-201ENST00000436830 412 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 RPL30P14-201ENST00000482744 348 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 AC010627.1-201ENST00000503819 1294 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.54□□□□□ -2.32
RIF1Q5UIP0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
RIF1Q5UIP0 AP005902.1-201ENST00000521358 186 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 CYCSP2-201ENST00000558168 301 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.54□□□□□ -2.32
RIF1Q5UIP0 AC006249.1-201ENST00000621223 471 ntBASIC0.54□□□□□ -2.32
RIF1Q5UIP0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.54□□□□□ -2.32
RIF1Q5UIP0 AL356473.1-201ENST00000406203 1408 ntBASIC0.53□□□□□ -2.32
RIF1Q5UIP0 Y_RNA.35-201ENST00000362601 101 ntBASIC0.53□□□□□ -2.32
RIF1Q5UIP0 SNORD114-3-201ENST00000364969 75 ntBASIC0.53□□□□□ -2.32
RIF1Q5UIP0 RPL23AP32-201ENST00000395315 459 ntBASIC0.53□□□□□ -2.32
RIF1Q5UIP0 RNA5SP118-201ENST00000410385 109 ntBASIC0.53□□□□□ -2.32
RIF1Q5UIP0 TMEM167AP1-201ENST00000423409 219 ntBASIC0.53□□□□□ -2.32
RIF1Q5UIP0 AC078857.1-201ENST00000469870 667 ntBASIC0.53□□□□□ -2.32
RIF1Q5UIP0 MIR3690-201ENST00000580266 75 ntBASIC0.53□□□□□ -2.32
RIF1Q5UIP0 UBE2L4-201ENST00000587688 464 ntBASIC0.53□□□□□ -2.32
RIF1Q5UIP0 AC087045.1-201ENST00000605856 382 ntBASIC0.53□□□□□ -2.32
RIF1Q5UIP0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
RIF1Q5UIP0 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.53□□□□□ -2.33
RIF1Q5UIP0 Y_RNA.453-201ENST00000384223 109 ntBASIC0.53□□□□□ -2.33
RIF1Q5UIP0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.53□□□□□ -2.33
RIF1Q5UIP0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.53□□□□□ -2.33
RIF1Q5UIP0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.53□□□□□ -2.33
RIF1Q5UIP0 AC106791.2-201ENST00000604680 391 ntBASIC0.53□□□□□ -2.33
RIF1Q5UIP0 AC107214.2-201ENST00000608204 634 ntBASIC0.53□□□□□ -2.33
RIF1Q5UIP0 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.53□□□□□ -2.33
RIF1Q5UIP0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.53□□□□□ -2.33
RIF1Q5UIP0 SNORA16B-201ENST00000364674 135 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AC068050.1-201ENST00000394891 380 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AC096649.2-201ENST00000416186 393 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 MTCO2P32-201ENST00000514865 403 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 SNORA3.4-201ENST00000515969 96 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 RNU6-496P-201ENST00000516145 99 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AL121839.1-201ENST00000556233 1185 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 SNRPGP17-201ENST00000603780 214 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AL136363.1-201ENST00000605349 337 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AL136313.1-201ENST00000624804 202 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 Y_RNA.447-201ENST00000384184 113 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 RNU6-1181P-201ENST00000384191 106 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 RPL30P13-201ENST00000418873 348 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AC244098.2-201ENST00000422068 99 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 KLRA1P-201ENST00000503499 986 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 Y_RNA.757-201ENST00000578934 114 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 MIR4514-201ENST00000581410 57 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 HMGN1P30-201ENST00000589286 268 ntBASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms