Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGXB3Q12766 AC025588.4-201ENST00000615802 908 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 AC091304.6-201ENST00000619761 202 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 AP003072.5-201ENST00000623872 773 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 AL118508.4-201ENST00000624142 1176 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 MIR338-201ENST00000636369 67 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 AC009541.1-201ENST00000438279 2662 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGXB3Q12766 AC117503.1-201ENST00000472241 394 ntBASIC1.31□□□□□ -2.2
HMGXB3Q12766 RNU6-970P-201ENST00000516312 107 ntBASIC1.31□□□□□ -2.2
HMGXB3Q12766 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGXB3Q12766 AC004812.1-201ENST00000540773 146 ntBASIC1.31□□□□□ -2.2
HMGXB3Q12766 UCA1.1-201ENST00000620952 75 ntBASIC1.31□□□□□ -2.2
HMGXB3Q12766 RNU1-105P-201ENST00000363470 161 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 Y_RNA.280-201ENST00000364765 112 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.3□□□□□ -2.2
HMGXB3Q12766 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.3□□□□□ -2.2
HMGXB3Q12766 AC099548.1-201ENST00000421443 426 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 PMCHL2-203ENST00000457791 237 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 CABYRP1-201ENST00000465493 1045 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 EIF4EP3-201ENST00000498782 656 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 AC023141.11-201ENST00000508864 202 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGXB3Q12766 AC008269.2-201ENST00000561915 1105 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGXB3Q12766 AC087481.2-201ENST00000565492 330 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 AC005786.1-201ENST00000588553 154 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.3□□□□□ -2.2
HMGXB3Q12766 AL137003.2-201ENST00000606924 2538 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.3□□□□□ -2.2
HMGXB3Q12766 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
HMGXB3Q12766 AL513475.1-201ENST00000406602 315 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 BUD31P2-201ENST00000449374 300 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGXB3Q12766 TRGVB-201ENST00000453257 471 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGXB3Q12766 RPS27P26-201ENST00000494583 239 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 AC104997.1-201ENST00000519761 717 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGXB3Q12766 AC073111.2-201ENST00000605657 1075 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 AL031775.1-201ENST00000607014 887 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGXB3Q12766 AL360181.4-201ENST00000621752 134 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.3□□□□□ -2.2
HMGXB3Q12766 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.29□□□□□ -2.2
HMGXB3Q12766 SNORA68.1-201ENST00000364537 132 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 RNU6-16P-201ENST00000384385 107 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 CIR1P3-201ENST00000405137 479 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 RNU6-920P-201ENST00000410926 92 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 RNU4-78P-201ENST00000410940 126 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 USP12PX-201ENST00000432383 1057 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.29□□□□□ -2.2
HMGXB3Q12766 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.29□□□□□ -2.2
HMGXB3Q12766 ANKRD26P4-201ENST00000455755 950 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 NDUFB4P2-201ENST00000509515 391 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 AC067942.3-201ENST00000512025 362 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 AC016065.2-201ENST00000514530 444 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 RNU6-1004P-201ENST00000516584 111 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.29□□□□□ -2.2
HMGXB3Q12766 AP001330.4-201ENST00000604350 154 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 AC106900.2-201ENST00000604994 317 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 AC025594.3-201ENST00000613068 790 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 AC003001.2-201ENST00000616294 831 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
HMGXB3Q12766 MIR6835-201ENST00000621552 64 ntBASIC1.29□□□□□ -2.2
HMGXB3Q12766 RNU6-185P-201ENST00000384421 107 ntBASIC1.28□□□□□ -2.2
HMGXB3Q12766 RNA5SP450-201ENST00000411206 102 ntBASIC1.28□□□□□ -2.2
HMGXB3Q12766 AL133384.1-201ENST00000412744 351 ntBASIC1.28□□□□□ -2.2
HMGXB3Q12766 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.28□□□□□ -2.2
HMGXB3Q12766 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.28□□□□□ -2.2
HMGXB3Q12766 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGXB3Q12766 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
HMGXB3Q12766 RPS20P20-201ENST00000460498 340 ntBASIC1.28□□□□□ -2.2
HMGXB3Q12766 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGXB3Q12766 RNU6-1308P-201ENST00000516817 103 ntBASIC1.28□□□□□ -2.2
HMGXB3Q12766 SNRPGP16-201ENST00000533275 226 ntBASIC1.28□□□□□ -2.2
HMGXB3Q12766 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGXB3Q12766 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.28□□□□□ -2.2
HMGXB3Q12766 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGXB3Q12766 XIAPP1-201ENST00000603162 600 ntBASIC1.28□□□□□ -2.2
HMGXB3Q12766 AC009229.3-201ENST00000608056 282 ntBASIC1.28□□□□□ -2.2
HMGXB3Q12766 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.28□□□□□ -2.2
HMGXB3Q12766 CR848007.1-201ENST00000442354 1699 ntBASIC1.27□□□□□ -2.21
HMGXB3Q12766 CCT4P2-201ENST00000233836 1548 ntBASIC1.27□□□□□ -2.21
HMGXB3Q12766 NACAP2-201ENST00000318548 624 ntBASIC1.27□□□□□ -2.21
HMGXB3Q12766 Y_RNA.136-201ENST00000363444 102 ntBASIC1.27□□□□□ -2.21
HMGXB3Q12766 RNU6-263P-201ENST00000363811 107 ntBASIC1.27□□□□□ -2.21
HMGXB3Q12766 RNA5SP499-201ENST00000363982 119 ntBASIC1.27□□□□□ -2.21
HMGXB3Q12766 SNORA16B-201ENST00000364674 135 ntBASIC1.27□□□□□ -2.21
HMGXB3Q12766 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
HMGXB3Q12766 C1DP3-201ENST00000455013 423 ntBASIC1.27□□□□□ -2.21
HMGXB3Q12766 AC005410.1-202ENST00000460347 485 ntBASIC1.27□□□□□ -2.21
HMGXB3Q12766 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.27□□□□□ -2.21
HMGXB3Q12766 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.27□□□□□ -2.21
HMGXB3Q12766 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.27□□□□□ -2.21
HMGXB3Q12766 ZNF92P3-201ENST00000596594 954 ntBASIC1.27□□□□□ -2.21
HMGXB3Q12766 AC087359.1-201ENST00000508335 1740 ntBASIC1.27□□□□□ -2.21
HMGXB3Q12766 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
HMGXB3Q12766 RNU5D-1-201ENST00000363299 116 ntBASIC1.26□□□□□ -2.21
HMGXB3Q12766 MT-TC-201ENST00000387405 66 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms