Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 U73479.1-201ENST00000618062 168 ntBASIC3.26□□□□□ -1.89
LTBQ06643 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.26□□□□□ -1.89
LTBQ06643 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.26□□□□□ -1.89
LTBQ06643 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
LTBQ06643 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
LTBQ06643 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LTBQ06643 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LTBQ06643 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LTBQ06643 AC073343.1-201ENST00000328239 651 ntBASIC3.25□□□□□ -1.89
LTBQ06643 Y_RNA.132-201ENST00000363421 102 ntBASIC3.25□□□□□ -1.89
LTBQ06643 Y_RNA.167-201ENST00000363735 109 ntBASIC3.25□□□□□ -1.89
LTBQ06643 SNORA38.1-201ENST00000364172 131 ntBASIC3.25□□□□□ -1.89
LTBQ06643 RNA5SP51-201ENST00000364750 119 ntBASIC3.25□□□□□ -1.89
LTBQ06643 SNORD115-7-201ENST00000365306 82 ntBASIC3.25□□□□□ -1.89
LTBQ06643 RNA5SP167-201ENST00000365461 116 ntBASIC3.25□□□□□ -1.89
LTBQ06643 RNU6-61P-201ENST00000365528 109 ntBASIC3.25□□□□□ -1.89
LTBQ06643 Y_RNA.510-201ENST00000384511 114 ntBASIC3.25□□□□□ -1.89
LTBQ06643 Y_RNA.576-201ENST00000384781 102 ntBASIC3.25□□□□□ -1.89
LTBQ06643 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LTBQ06643 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LTBQ06643 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.25□□□□□ -1.89
LTBQ06643 UBE2FP1-201ENST00000416536 447 ntBASIC3.25□□□□□ -1.89
LTBQ06643 HSPE1P1-201ENST00000421494 318 ntBASIC3.25□□□□□ -1.89
LTBQ06643 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.25□□□□□ -1.89
LTBQ06643 SAR1AP4-201ENST00000429225 591 ntBASIC3.25□□□□□ -1.89
LTBQ06643 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.25□□□□□ -1.89
LTBQ06643 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.25□□□□□ -1.89
LTBQ06643 RPL35AP22-201ENST00000436855 335 ntBASIC3.25□□□□□ -1.89
LTBQ06643 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.25□□□□□ -1.89
LTBQ06643 HMGB3P11-201ENST00000440127 604 ntBASIC3.25□□□□□ -1.89
LTBQ06643 AC020550.1-201ENST00000447385 163 ntBASIC3.25□□□□□ -1.89
LTBQ06643 snoU13.3-201ENST00000459441 104 ntBASIC3.25□□□□□ -1.89
LTBQ06643 MTND4P17-201ENST00000470444 350 ntBASIC3.25□□□□□ -1.89
LTBQ06643 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.25□□□□□ -1.89
LTBQ06643 AC091885.1-201ENST00000506658 268 ntBASIC3.25□□□□□ -1.89
LTBQ06643 CCDC34P1-201ENST00000507441 517 ntBASIC3.25□□□□□ -1.89
LTBQ06643 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.25□□□□□ -1.89
LTBQ06643 RN7SKP116-201ENST00000516902 319 ntBASIC3.25□□□□□ -1.89
LTBQ06643 AP006245.1-201ENST00000522549 120 ntBASIC3.25□□□□□ -1.89
LTBQ06643 AC109635.4-202ENST00000531666 412 ntBASIC3.25□□□□□ -1.89
LTBQ06643 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LTBQ06643 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LTBQ06643 AL442663.2-201ENST00000554385 511 ntBASIC3.25□□□□□ -1.89
LTBQ06643 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.25□□□□□ -1.89
LTBQ06643 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.25□□□□□ -1.89
LTBQ06643 AC012669.1-201ENST00000603209 283 ntBASIC3.25□□□□□ -1.89
LTBQ06643 AL031176.1-201ENST00000604554 466 ntBASIC3.25□□□□□ -1.89
LTBQ06643 IGHV3-29-201ENST00000604817 344 ntBASIC3.25□□□□□ -1.89
LTBQ06643 Y_RNA.812-201ENST00000610788 101 ntBASIC3.25□□□□□ -1.89
LTBQ06643 AL365204.3-201ENST00000612448 685 ntBASIC3.25□□□□□ -1.89
LTBQ06643 Y_RNA.784-201ENST00000613803 101 ntBASIC3.25□□□□□ -1.89
LTBQ06643 Y_RNA.787-201ENST00000616522 101 ntBASIC3.25□□□□□ -1.89
LTBQ06643 Y_RNA.780-201ENST00000617336 101 ntBASIC3.25□□□□□ -1.89
LTBQ06643 Y_RNA.801-201ENST00000619005 101 ntBASIC3.25□□□□□ -1.89
LTBQ06643 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.25□□□□□ -1.89
LTBQ06643 AC025034.2-201ENST00000623264 286 ntBASIC3.25□□□□□ -1.89
LTBQ06643 AC243312.2-201ENST00000623340 601 ntBASIC3.25□□□□□ -1.89
LTBQ06643 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.25□□□□□ -1.89
LTBQ06643 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LTBQ06643 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.25□□□□□ -1.89
LTBQ06643 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LTBQ06643 MTND4P14-201ENST00000435799 1354 ntBASIC3.25□□□□□ -1.89
LTBQ06643 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.25□□□□□ -1.89
LTBQ06643 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
LTBQ06643 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LTBQ06643 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
LTBQ06643 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LTBQ06643 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.24□□□□□ -1.89
LTBQ06643 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.24□□□□□ -1.89
LTBQ06643 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
LTBQ06643 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.24□□□□□ -1.89
LTBQ06643 Y_RNA.100-201ENST00000363141 102 ntBASIC3.24□□□□□ -1.89
LTBQ06643 RNU6-179P-201ENST00000363350 107 ntBASIC3.24□□□□□ -1.89
LTBQ06643 RNU6-960P-201ENST00000364056 120 ntBASIC3.24□□□□□ -1.89
LTBQ06643 Y_RNA.301-201ENST00000364990 103 ntBASIC3.24□□□□□ -1.89
LTBQ06643 Y_RNA.378-201ENST00000365652 113 ntBASIC3.24□□□□□ -1.89
LTBQ06643 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LTBQ06643 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LTBQ06643 AL109755.1-201ENST00000401791 649 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AL590004.1-201ENST00000405321 300 ntBASIC3.24□□□□□ -1.89
LTBQ06643 RN7SKP140-201ENST00000411196 284 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AC017079.2-201ENST00000416102 485 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AF228730.4-201ENST00000421457 183 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AC006989.1-201ENST00000427212 131 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.24□□□□□ -1.89
LTBQ06643 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.24□□□□□ -1.89
LTBQ06643 PRPS1P1-201ENST00000445305 876 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.24□□□□□ -1.89
LTBQ06643 GAPDHP27-201ENST00000447427 1020 ntBASIC3.24□□□□□ -1.89
LTBQ06643 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.24□□□□□ -1.89
LTBQ06643 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.24□□□□□ -1.89
LTBQ06643 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.24□□□□□ -1.89
LTBQ06643 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.24□□□□□ -1.89
LTBQ06643 RN7SL807P-201ENST00000470923 297 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AC083904.1-201ENST00000487828 231 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AC005921.1-201ENST00000510589 286 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.24□□□□□ -1.89
LTBQ06643 RNU6-579P-201ENST00000516879 102 ntBASIC3.24□□□□□ -1.89
LTBQ06643 RNU6-1092P-201ENST00000516955 87 ntBASIC3.24□□□□□ -1.89
LTBQ06643 RNU6-1231P-201ENST00000517185 103 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms