Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC004812.1-201ENST00000540773 146 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.42□□□□□ -2.34
HSPG2P98160 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.42□□□□□ -2.34
HSPG2P98160 CYP4A27P-201ENST00000567218 190 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
HSPG2P98160 AL118508.4-201ENST00000624142 1176 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 AL391516.1-201ENST00000554380 2449 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 RNU1-105P-201ENST00000363470 161 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
HSPG2P98160 XKRYP1-201ENST00000423438 492 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 XKRYP2-201ENST00000432915 492 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.42□□□□□ -2.34
HSPG2P98160 RNU6-496P-201ENST00000516145 99 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.42□□□□□ -2.34
HSPG2P98160 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.42□□□□□ -2.34
HSPG2P98160 AC025165.5-201ENST00000602802 578 ntBASIC0.42□□□□□ -2.34
HSPG2P98160 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
HSPG2P98160 SNORD114-15-201ENST00000364687 72 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 MIR508-201ENST00000384857 115 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 MIR329-1-201ENST00000385028 80 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 RPL37P6-202ENST00000464216 403 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 RPS27P26-201ENST00000494583 239 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 MTCYBP41-201ENST00000528913 1123 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.41□□□□□ -2.34
HSPG2P98160 NUTF2P8-201ENST00000604593 363 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 AL590282.1-201ENST00000610379 1136 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.41□□□□□ -2.34
HSPG2P98160 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
HSPG2P98160 MIR607-201ENST00000385241 96 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
HSPG2P98160 Y_RNA.610-201ENST00000410681 103 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.41□□□□□ -2.34
HSPG2P98160 RPL39P28-201ENST00000465655 155 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 LARP7P4-201ENST00000481075 878 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 EIF4A1P12-201ENST00000551910 141 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 MIR6718-201ENST00000616153 80 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 RNA5SP299-201ENST00000391203 116 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.41□□□□□ -2.34
HSPG2P98160 RPL31P20-201ENST00000449593 360 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 AC008834.1-201ENST00000511612 175 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 RNU6-758P-201ENST00000516292 89 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.41□□□□□ -2.34
HSPG2P98160 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.41□□□□□ -2.34
HSPG2P98160 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.41□□□□□ -2.34
HSPG2P98160 PTGES3P2-201ENST00000407942 482 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 RNU6-193P-201ENST00000410977 107 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.41□□□□□ -2.34
HSPG2P98160 MTCYBP24-201ENST00000420387 1106 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.41□□□□□ -2.34
HSPG2P98160 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.41□□□□□ -2.34
HSPG2P98160 MTND4LP24-201ENST00000572277 291 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 AL713998.2-201ENST00000604538 1198 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 AP003476.1-201ENST00000623984 516 ntBASIC0.41□□□□□ -2.34
HSPG2P98160 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 AC010301.1-201ENST00000473936 355 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 AC105914.1-201ENST00000511798 226 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.4□□□□□ -2.35
HSPG2P98160 AC084033.1-201ENST00000550830 633 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 FAM60BP-201ENST00000578364 658 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 RNU1-23P-201ENST00000363361 144 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 MT-TP-201ENST00000387461 68 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
HSPG2P98160 AC092648.1-201ENST00000425870 423 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 OSTCP8-201ENST00000445117 448 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
HSPG2P98160 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC0.4□□□□□ -2.35
HSPG2P98160 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.4□□□□□ -2.35
HSPG2P98160 AC079148.1-201ENST00000565944 819 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.4□□□□□ -2.35
HSPG2P98160 MIR4529-201ENST00000578110 78 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 Y_RNA.572-201ENST00000384757 98 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 AP002784.2-201ENST00000397300 549 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 AC117454.1-201ENST00000491120 168 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 AC093770.1-201ENST00000511559 571 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.4□□□□□ -2.35
HSPG2P98160 RRN3P3-201ENST00000549207 578 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 AL109918.3-201ENST00000603072 338 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 AC139769.3-201ENST00000618383 175 ntBASIC0.4□□□□□ -2.35
HSPG2P98160 RNU6-1072P-201ENST00000384703 107 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 RNU6-443P-201ENST00000384780 107 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 HNRNPDP2-201ENST00000406475 478 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
HSPG2P98160 OR5AL2P-201ENST00000532185 920 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.39□□□□□ -2.35
HSPG2P98160 MIR4658-201ENST00000584344 65 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.39□□□□□ -2.35
HSPG2P98160 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.39□□□□□ -2.35
HSPG2P98160 COL6A4P2-205ENST00000509855 506 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.39□□□□□ -2.35
HSPG2P98160 AP003072.4-201ENST00000624580 310 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
HSPG2P98160 AC093155.1-201ENST00000440164 826 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 AC055731.1-201ENST00000474387 401 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 RPL30P14-201ENST00000482744 348 ntBASIC0.39□□□□□ -2.35
HSPG2P98160 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
HSPG2P98160 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.39□□□□□ -2.35
HSPG2P98160 AP003327.1-201ENST00000529684 127 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms