Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC138761.3-201ENST00000579993 334 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 AC104763.2-201ENST00000604179 382 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 AL670379.10-201ENST00000604330 253 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 AL670379.9-201ENST00000605428 253 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 RNA5SP108-201ENST00000605921 117 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 AC040896.1-201ENST00000613819 479 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 AC103705.1-201ENST00000619013 241 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HERVK_113P62684 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HERVK_113P62684 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HERVK_113P62684 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HERVK_113P62684 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HERVK_113P62684 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.31□□□□□ -1.72
HERVK_113P62684 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HERVK_113P62684 LINC02471-203ENST00000641941 4752 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HERVK_113P62684 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HERVK_113P62684 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HERVK_113P62684 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HERVK_113P62684 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HERVK_113P62684 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HERVK_113P62684 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HERVK_113P62684 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HERVK_113P62684 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HERVK_113P62684 RNU1-18P-201ENST00000363062 164 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 RNA5SP267-201ENST00000364893 126 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 SNORD42.2-201ENST00000365570 69 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 RNU6-474P-201ENST00000384243 107 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 RNU6-393P-201ENST00000384475 107 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 MIR708-201ENST00000390708 88 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 HMGN2P8-201ENST00000391458 268 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 MIR450B-201ENST00000401182 78 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 RN7SKP158-201ENST00000410453 326 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.3□□□□□ -1.72
HERVK_113P62684 AC097713.2-201ENST00000430199 356 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HERVK_113P62684 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.3□□□□□ -1.72
HERVK_113P62684 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.3□□□□□ -1.72
HERVK_113P62684 Y_RNA.631-201ENST00000459607 101 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 HMGB3P15-201ENST00000507326 574 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 VWA8P1-201ENST00000510889 176 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 GMPSP1-201ENST00000514075 579 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 RN7SKP60-201ENST00000516985 239 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 RNU4-60P-201ENST00000517239 135 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 AC090281.1-201ENST00000523019 276 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 APOOP3-201ENST00000536787 586 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 AC012182.1-201ENST00000570133 895 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 AC007151.1-201ENST00000572774 483 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.3□□□□□ -1.72
HERVK_113P62684 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.3□□□□□ -1.72
HERVK_113P62684 AC067852.3-201ENST00000589177 561 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 AC022893.3-201ENST00000607665 437 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.3□□□□□ -1.72
HERVK_113P62684 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.3□□□□□ -1.72
HERVK_113P62684 AL359547.2-201ENST00000615810 418 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.3□□□□□ -1.72
HERVK_113P62684 NCAPGP1-201ENST00000505112 1814 ntBASIC4.3□□□□□ -1.72
HERVK_113P62684 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HERVK_113P62684 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.3□□□□□ -1.72
HERVK_113P62684 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
HERVK_113P62684 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HERVK_113P62684 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.29□□□□□ -1.72
HERVK_113P62684 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERVK_113P62684 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERVK_113P62684 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERVK_113P62684 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HERVK_113P62684 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HERVK_113P62684 SNORD9-201ENST00000362566 104 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 RNU6-715P-201ENST00000365204 103 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 RNU6-1074P-201ENST00000383995 104 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 Y_RNA.445-201ENST00000384168 102 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 MIR606-201ENST00000384851 96 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 SNORA16.2-201ENST00000390991 127 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HERVK_113P62684 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.29□□□□□ -1.72
HERVK_113P62684 AL158156.1-201ENST00000422509 473 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.29□□□□□ -1.72
HERVK_113P62684 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.29□□□□□ -1.72
HERVK_113P62684 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.29□□□□□ -1.72
HERVK_113P62684 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.29□□□□□ -1.72
HERVK_113P62684 RN7SL93P-201ENST00000463035 293 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 S100A11P1-201ENST00000477525 312 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 MTND5P5-201ENST00000503764 376 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.29□□□□□ -1.72
HERVK_113P62684 MIR2114-201ENST00000516645 80 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 SCARNA13-201ENST00000516672 275 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.29□□□□□ -1.72
HERVK_113P62684 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.29□□□□□ -1.72
HERVK_113P62684 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HERVK_113P62684 AC006504.6-201ENST00000590142 199 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 AC124303.1-201ENST00000605703 360 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.29□□□□□ -1.72
HERVK_113P62684 MIR4275-201ENST00000636486 87 ntBASIC4.29□□□□□ -1.72
HERVK_113P62684 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERVK_113P62684 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERVK_113P62684 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.29□□□□□ -1.72
HERVK_113P62684 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HERVK_113P62684 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.29□□□□□ -1.72
HERVK_113P62684 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HERVK_113P62684 AC007823.1-201ENST00000569932 1566 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms