Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SRP54P61011 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SRP54P61011 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.65□□□□□ -1.99
SRP54P61011 RNU6-511P-201ENST00000363496 107 ntBASIC2.65□□□□□ -1.99
SRP54P61011 SNORA25.6-201ENST00000364121 118 ntBASIC2.65□□□□□ -1.99
SRP54P61011 RNU6-461P-201ENST00000364195 107 ntBASIC2.65□□□□□ -1.99
SRP54P61011 RNU6-512P-201ENST00000364438 103 ntBASIC2.65□□□□□ -1.99
SRP54P61011 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SRP54P61011 RNU6-701P-201ENST00000384059 107 ntBASIC2.65□□□□□ -1.99
SRP54P61011 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.65□□□□□ -1.99
SRP54P61011 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.65□□□□□ -1.99
SRP54P61011 AL593851.1-201ENST00000426171 157 ntBASIC2.65□□□□□ -1.99
SRP54P61011 SUMO1P4-201ENST00000429430 302 ntBASIC2.65□□□□□ -1.99
SRP54P61011 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SRP54P61011 AC112220.1-201ENST00000434628 355 ntBASIC2.65□□□□□ -1.99
SRP54P61011 NEFMP1-201ENST00000443423 1006 ntBASIC2.65□□□□□ -1.99
SRP54P61011 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.65□□□□□ -1.99
SRP54P61011 AC112673.1-201ENST00000513168 575 ntBASIC2.65□□□□□ -1.99
SRP54P61011 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.65□□□□□ -1.99
SRP54P61011 AC022616.6-201ENST00000520479 119 ntBASIC2.65□□□□□ -1.99
SRP54P61011 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SRP54P61011 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.65□□□□□ -1.99
SRP54P61011 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
SRP54P61011 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.65□□□□□ -1.99
SRP54P61011 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.65□□□□□ -1.99
SRP54P61011 MTCYBP22-201ENST00000603788 447 ntBASIC2.65□□□□□ -1.99
SRP54P61011 AL358072.1-201ENST00000604156 575 ntBASIC2.65□□□□□ -1.99
SRP54P61011 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.65□□□□□ -1.99
SRP54P61011 AL356266.1-201ENST00000623311 483 ntBASIC2.65□□□□□ -1.99
SRP54P61011 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.65□□□□□ -1.99
SRP54P61011 AC092192.1-201ENST00000633154 1018 ntBASIC2.65□□□□□ -1.99
SRP54P61011 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SRP54P61011 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SRP54P61011 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SRP54P61011 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.64□□□□□ -1.99
SRP54P61011 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SRP54P61011 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SRP54P61011 AL356057.3-201ENST00000402607 340 ntBASIC2.64□□□□□ -1.99
SRP54P61011 AL356057.2-201ENST00000403318 432 ntBASIC2.64□□□□□ -1.99
SRP54P61011 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.64□□□□□ -1.99
SRP54P61011 AL365184.2-201ENST00000431139 435 ntBASIC2.64□□□□□ -1.99
SRP54P61011 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.64□□□□□ -1.99
SRP54P61011 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.64□□□□□ -1.99
SRP54P61011 OSTCP8-201ENST00000445117 448 ntBASIC2.64□□□□□ -1.99
SRP54P61011 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.64□□□□□ -1.99
SRP54P61011 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.64□□□□□ -1.99
SRP54P61011 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.64□□□□□ -1.99
SRP54P61011 MTATP6P7-201ENST00000453315 681 ntBASIC2.64□□□□□ -1.99
SRP54P61011 MTND1P12-201ENST00000455231 147 ntBASIC2.64□□□□□ -1.99
SRP54P61011 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.64□□□□□ -1.99
SRP54P61011 AC128713.1-201ENST00000471495 306 ntBASIC2.64□□□□□ -1.99
SRP54P61011 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.64□□□□□ -1.99
SRP54P61011 AC098591.2-201ENST00000510152 315 ntBASIC2.64□□□□□ -1.99
SRP54P61011 AC114781.4-201ENST00000513707 639 ntBASIC2.64□□□□□ -1.99
SRP54P61011 RNU4-29P-201ENST00000515943 174 ntBASIC2.64□□□□□ -1.99
SRP54P61011 SNORA9.3-201ENST00000516383 129 ntBASIC2.64□□□□□ -1.99
SRP54P61011 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.64□□□□□ -1.99
SRP54P61011 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.64□□□□□ -1.99
SRP54P61011 COX6CP5-201ENST00000527162 228 ntBASIC2.64□□□□□ -1.99
SRP54P61011 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.64□□□□□ -1.99
SRP54P61011 ZNF519P3-201ENST00000557158 1032 ntBASIC2.64□□□□□ -1.99
SRP54P61011 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.64□□□□□ -1.99
SRP54P61011 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.64□□□□□ -1.99
SRP54P61011 MIR5194-201ENST00000582634 120 ntBASIC2.64□□□□□ -1.99
SRP54P61011 AC135507.1-201ENST00000607214 561 ntBASIC2.64□□□□□ -1.99
SRP54P61011 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.64□□□□□ -1.99
SRP54P61011 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.64□□□□□ -1.99
SRP54P61011 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.64□□□□□ -1.99
SRP54P61011 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.64□□□□□ -1.99
SRP54P61011 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SRP54P61011 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.64□□□□□ -1.99
SRP54P61011 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SRP54P61011 AL445523.1-201ENST00000451184 1362 ntBASIC2.63□□□□□ -1.99
SRP54P61011 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.63□□□□□ -1.99
SRP54P61011 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SRP54P61011 RNU5F-6P-201ENST00000362979 116 ntBASIC2.63□□□□□ -1.99
SRP54P61011 RNU6-533P-201ENST00000384144 107 ntBASIC2.63□□□□□ -1.99
SRP54P61011 RNU6-14P-201ENST00000384630 106 ntBASIC2.63□□□□□ -1.99
SRP54P61011 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.63□□□□□ -1.99
SRP54P61011 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.63□□□□□ -1.99
SRP54P61011 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.63□□□□□ -1.99
SRP54P61011 AL512286.1-201ENST00000439244 400 ntBASIC2.63□□□□□ -1.99
SRP54P61011 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.63□□□□□ -1.99
SRP54P61011 RNU6-953P-201ENST00000459154 107 ntBASIC2.63□□□□□ -1.99
SRP54P61011 AC068587.2-201ENST00000478386 781 ntBASIC2.63□□□□□ -1.99
SRP54P61011 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.63□□□□□ -1.99
SRP54P61011 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.63□□□□□ -1.99
SRP54P61011 AC022447.1-201ENST00000515358 464 ntBASIC2.63□□□□□ -1.99
SRP54P61011 RNU5F-8P-201ENST00000515941 111 ntBASIC2.63□□□□□ -1.99
SRP54P61011 RPPH1-2P-201ENST00000516688 293 ntBASIC2.63□□□□□ -1.99
SRP54P61011 RNU6-703P-201ENST00000516946 107 ntBASIC2.63□□□□□ -1.99
SRP54P61011 AC107934.1-201ENST00000522215 217 ntBASIC2.63□□□□□ -1.99
SRP54P61011 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.63□□□□□ -1.99
SRP54P61011 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.63□□□□□ -1.99
SRP54P61011 MIR4446-201ENST00000578505 67 ntBASIC2.63□□□□□ -1.99
SRP54P61011 AC090616.3-201ENST00000582184 217 ntBASIC2.63□□□□□ -1.99
SRP54P61011 AP001981.2-201ENST00000603241 418 ntBASIC2.63□□□□□ -1.99
SRP54P61011 AL359999.1-201ENST00000604513 294 ntBASIC2.63□□□□□ -1.99
SRP54P61011 AC026790.2-201ENST00000606282 430 ntBASIC2.63□□□□□ -1.99
SRP54P61011 AC005046.1-201ENST00000608515 625 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms