Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AL162274.2-201ENST00000614406 332 ntBASIC3.24□□□□□ -1.89
CLDN2P57739 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CLDN2P57739 AL354950.2-201ENST00000617939 290 ntBASIC3.24□□□□□ -1.89
CLDN2P57739 AF117829.1-206ENST00000621883 3802 ntBASIC3.24□□□□□ -1.89
CLDN2P57739 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN2P57739 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN2P57739 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.24□□□□□ -1.89
CLDN2P57739 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CLDN2P57739 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN2P57739 CKAP2P1-201ENST00000555477 2049 ntBASIC3.24□□□□□ -1.89
CLDN2P57739 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN2P57739 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN2P57739 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN2P57739 FAM35BP-202ENST00000497389 3337 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN2P57739 RNA5SP295-201ENST00000362655 121 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 Y_RNA.245-201ENST00000364493 95 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN2P57739 SNORA69-201ENST00000383895 132 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 Y_RNA.453-201ENST00000384223 109 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 SNORA1.3-201ENST00000384676 136 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AL591416.1-201ENST00000404015 867 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 MIR1277-201ENST00000408536 78 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN2P57739 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN2P57739 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN2P57739 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN2P57739 AC092047.1-201ENST00000424997 240 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN2P57739 SNRPEP4-201ENST00000435815 279 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN2P57739 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN2P57739 SEPT14P3-201ENST00000439401 183 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 PIGFP3-201ENST00000441918 722 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN2P57739 AL732372.2-207ENST00000445840 183 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN2P57739 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN2P57739 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN2P57739 SEPT14P2-201ENST00000453405 183 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 RNA5SP310-201ENST00000459084 116 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 KC877373.1-201ENST00000479066 408 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AC104806.1-201ENST00000508720 308 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.23□□□□□ -1.89
CLDN2P57739 SEPT14P4-201ENST00000513445 186 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 RNA5SP341-201ENST00000516261 117 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 RNU6-1178P-201ENST00000516674 107 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 RN7SKP219-201ENST00000516825 296 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 RNU6-143P-201ENST00000516942 93 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 RNU6-835P-201ENST00000516974 104 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 RNA5SP290-201ENST00000517133 127 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN2P57739 FO082796.1-201ENST00000523795 183 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 CASP1P1-201ENST00000526345 212 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AC022690.1-201ENST00000526681 550 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN2P57739 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN2P57739 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.23□□□□□ -1.89
CLDN2P57739 MIR4703-201ENST00000577728 79 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AC006504.3-201ENST00000586818 523 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 BNIP3P9-201ENST00000603714 553 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AC008945.2-201ENST00000606056 604 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AC027309.3-201ENST00000623419 351 ntBASIC3.23□□□□□ -1.89
CLDN2P57739 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN2P57739 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CLDN2P57739 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN2P57739 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CLDN2P57739 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN2P57739 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN2P57739 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
CLDN2P57739 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN2P57739 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN2P57739 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN2P57739 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN2P57739 AL136164.4-201ENST00000625013 2135 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 RNU6-1287P-201ENST00000362914 107 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 Y_RNA.381-201ENST00000365666 102 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 RNU6-1060P-201ENST00000384664 107 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 Z98941.1-201ENST00000407764 100 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 MIR1183-201ENST00000408856 89 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN2P57739 RNU4-46P-201ENST00000410818 138 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 RNU4-47P-201ENST00000410876 114 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 RHEBP3-201ENST00000411920 351 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN2P57739 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN2P57739 RPL23AP69-201ENST00000431134 458 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN2P57739 AL512844.2-201ENST00000433990 593 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 AC092573.2-201ENST00000434546 243 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 AC073415.1-201ENST00000449240 153 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN2P57739 RN7SL863P-201ENST00000462370 296 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 AC109925.1-201ENST00000478069 331 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 AC233702.1-201ENST00000482905 502 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 AC117522.3-201ENST00000507974 584 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 PCBP2P3-201ENST00000509726 843 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 RNU6-123P-201ENST00000516163 102 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.22□□□□□ -1.89
CLDN2P57739 RNA5SP471-201ENST00000516971 106 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms