Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXG1P55316 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FOXG1P55316 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXG1P55316 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
FOXG1P55316 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXG1P55316 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
FOXG1P55316 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FOXG1P55316 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXG1P55316 AL359893.1-201ENST00000447628 1580 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 KPNA2P1-201ENST00000458289 1591 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 ZNF734P-201ENST00000419494 1534 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 RNU6-379P-201ENST00000363813 104 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 SNORD82-201ENST00000365530 70 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 Y_RNA.463-201ENST00000384271 102 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 SNORA24.1-201ENST00000384401 135 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 RNY1P14-201ENST00000384426 108 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 Y_RNA.574-201ENST00000384766 95 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 Y_RNA.576-201ENST00000384781 102 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 RNU2-3P-201ENST00000410144 191 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 RNU2-47P-201ENST00000410649 186 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 SNORA57.3-201ENST00000411095 141 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 HMGN1P24-201ENST00000412282 298 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXG1P55316 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXG1P55316 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXG1P55316 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXG1P55316 GOT2P5-201ENST00000433995 546 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 RPL23AP33-201ENST00000442301 452 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FOXG1P55316 AL590399.6-201ENST00000446396 307 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 HMGN2P7-201ENST00000456186 273 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 AL133162.1-201ENST00000463228 453 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.31□□□□□ -1.88
FOXG1P55316 TRBV12-2-201ENST00000489763 344 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXG1P55316 AC097473.1-201ENST00000508142 408 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 AC026782.1-201ENST00000512952 449 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.31□□□□□ -1.88
FOXG1P55316 HIGD1AP3-201ENST00000515857 278 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 RNU6-798P-201ENST00000516912 103 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 FAM60DP-201ENST00000524174 632 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXG1P55316 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXG1P55316 AC008011.1-201ENST00000545989 227 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 AC023043.2-201ENST00000589678 1026 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 AC018889.1-201ENST00000605372 397 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 RNU1-30P-201ENST00000606575 163 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 AL590099.1-201ENST00000615276 138 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 AC098657.3-201ENST00000620434 263 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 CR392039.5-201ENST00000623201 510 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 AC012442.3-202ENST00000636742 206 ntBASIC3.31□□□□□ -1.88
FOXG1P55316 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXG1P55316 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXG1P55316 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXG1P55316 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.31□□□□□ -1.88
FOXG1P55316 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXG1P55316 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
FOXG1P55316 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
FOXG1P55316 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXG1P55316 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXG1P55316 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXG1P55316 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXG1P55316 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXG1P55316 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXG1P55316 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXG1P55316 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXG1P55316 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXG1P55316 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
FOXG1P55316 RNU6-1287P-201ENST00000362914 107 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 SNORA73.2-201ENST00000364946 201 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 RNU6-61P-201ENST00000365528 109 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 SNORA75B-201ENST00000384053 137 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 RNU6-1060P-201ENST00000384664 107 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 EIF4E2P1-201ENST00000393781 255 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 MIR450B-201ENST00000401182 78 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 AC080125.1-201ENST00000414888 684 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXG1P55316 AC017083.1-201ENST00000428093 483 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 AC093106.2-201ENST00000428212 385 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 MTND2P29-201ENST00000438595 412 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXG1P55316 RPS26P15-201ENST00000488067 348 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXG1P55316 AC104806.1-201ENST00000508720 308 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 AC107222.1-201ENST00000510899 637 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 RNU6-388P-201ENST00000517012 105 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 RNU6-389P-201ENST00000517048 105 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 RNU4-60P-201ENST00000517239 135 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 AC087854.1-201ENST00000519706 414 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXG1P55316 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXG1P55316 AL133271.1-201ENST00000538229 291 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 OR11H5P-201ENST00000554039 926 ntBASIC3.3□□□□□ -1.88
FOXG1P55316 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.3□□□□□ -1.88
FOXG1P55316 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXG1P55316 AL512605.2-201ENST00000592972 256 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms