Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.76□□□□□ -1.97
VCPP55072 AL353997.5-201ENST00000618886 171 ntBASIC2.76□□□□□ -1.97
VCPP55072 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.76□□□□□ -1.97
VCPP55072 PISRT1-201ENST00000626175 531 ntBASIC2.76□□□□□ -1.97
VCPP55072 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
VCPP55072 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VCPP55072 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.76□□□□□ -1.97
VCPP55072 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
VCPP55072 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VCPP55072 RNU6-501P-201ENST00000364072 100 ntBASIC2.75□□□□□ -1.97
VCPP55072 SNORA25.6-201ENST00000364121 118 ntBASIC2.75□□□□□ -1.97
VCPP55072 MIR19A-201ENST00000384878 82 ntBASIC2.75□□□□□ -1.97
VCPP55072 AL049545.1-201ENST00000401856 572 ntBASIC2.75□□□□□ -1.97
VCPP55072 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.75□□□□□ -1.97
VCPP55072 UBE2FP1-201ENST00000416536 447 ntBASIC2.75□□□□□ -1.97
VCPP55072 AL365203.2-201ENST00000423444 196 ntBASIC2.75□□□□□ -1.97
VCPP55072 RPS6P15-201ENST00000431996 751 ntBASIC2.75□□□□□ -1.97
VCPP55072 AL512286.1-201ENST00000439244 400 ntBASIC2.75□□□□□ -1.97
VCPP55072 RPS15AP27-201ENST00000449183 343 ntBASIC2.75□□□□□ -1.97
VCPP55072 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.75□□□□□ -1.97
VCPP55072 MTND2P24-201ENST00000453434 806 ntBASIC2.75□□□□□ -1.97
VCPP55072 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.75□□□□□ -1.97
VCPP55072 MTCO1P42-201ENST00000457379 726 ntBASIC2.75□□□□□ -1.97
VCPP55072 AC055855.1-201ENST00000489563 579 ntBASIC2.75□□□□□ -1.97
VCPP55072 CKS1BP2-201ENST00000497342 240 ntBASIC2.75□□□□□ -1.97
VCPP55072 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.75□□□□□ -1.97
VCPP55072 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.75□□□□□ -1.97
VCPP55072 AC008716.1-201ENST00000511084 513 ntBASIC2.75□□□□□ -1.97
VCPP55072 MRPS36P2-201ENST00000512569 299 ntBASIC2.75□□□□□ -1.97
VCPP55072 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.75□□□□□ -1.97
VCPP55072 AC116347.2-201ENST00000514912 523 ntBASIC2.75□□□□□ -1.97
VCPP55072 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.75□□□□□ -1.97
VCPP55072 SCARNA15.2-201ENST00000516409 127 ntBASIC2.75□□□□□ -1.97
VCPP55072 RNU6-840P-201ENST00000517275 65 ntBASIC2.75□□□□□ -1.97
VCPP55072 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.75□□□□□ -1.97
VCPP55072 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.75□□□□□ -1.97
VCPP55072 AC124947.2-202ENST00000552735 133 ntBASIC2.75□□□□□ -1.97
VCPP55072 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.75□□□□□ -1.97
VCPP55072 AL133153.1-201ENST00000557756 303 ntBASIC2.75□□□□□ -1.97
VCPP55072 TPMTP1-201ENST00000592307 737 ntBASIC2.75□□□□□ -1.97
VCPP55072 AC068790.3-201ENST00000602988 553 ntBASIC2.75□□□□□ -1.97
VCPP55072 AC004908.2-201ENST00000609090 574 ntBASIC2.75□□□□□ -1.97
VCPP55072 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VCPP55072 AC122133.1-201ENST00000613964 233 ntBASIC2.75□□□□□ -1.97
VCPP55072 MIR7844-201ENST00000616161 122 ntBASIC2.75□□□□□ -1.97
VCPP55072 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.75□□□□□ -1.97
VCPP55072 AL512643.1-201ENST00000635735 524 ntBASIC2.75□□□□□ -1.97
VCPP55072 CR848007.1-201ENST00000442354 1699 ntBASIC2.75□□□□□ -1.97
VCPP55072 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.75□□□□□ -1.97
VCPP55072 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCPP55072 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCPP55072 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.74□□□□□ -1.97
VCPP55072 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VCPP55072 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCPP55072 RNA5SP393-201ENST00000363423 117 ntBASIC2.74□□□□□ -1.97
VCPP55072 RNU6-553P-201ENST00000364047 96 ntBASIC2.74□□□□□ -1.97
VCPP55072 Y_RNA.338-201ENST00000365320 114 ntBASIC2.74□□□□□ -1.97
VCPP55072 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.74□□□□□ -1.97
VCPP55072 RNU1-39P-201ENST00000383897 165 ntBASIC2.74□□□□□ -1.97
VCPP55072 AL109755.1-201ENST00000401791 649 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC078974.1-201ENST00000411597 223 ntBASIC2.74□□□□□ -1.97
VCPP55072 VPS26BP1-201ENST00000417155 755 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.74□□□□□ -1.97
VCPP55072 AL365184.2-201ENST00000431139 435 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.74□□□□□ -1.97
VCPP55072 RPS15AP7-201ENST00000439294 405 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.74□□□□□ -1.97
VCPP55072 GDI2P2-201ENST00000445131 608 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VCPP55072 CACYBPP2-201ENST00000453625 678 ntBASIC2.74□□□□□ -1.97
VCPP55072 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.74□□□□□ -1.97
VCPP55072 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.74□□□□□ -1.97
VCPP55072 MTCO2P6-201ENST00000463134 685 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.74□□□□□ -1.97
VCPP55072 TBCAP3-201ENST00000512475 312 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.74□□□□□ -1.97
VCPP55072 RNU6-759P-201ENST00000516740 103 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC100870.1-201ENST00000522035 505 ntBASIC2.74□□□□□ -1.97
VCPP55072 AP002748.2-201ENST00000528671 348 ntBASIC2.74□□□□□ -1.97
VCPP55072 AP000907.2-201ENST00000530827 353 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.74□□□□□ -1.97
VCPP55072 GLYCAM1-201ENST00000546596 285 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC123904.3-201ENST00000547218 814 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.74□□□□□ -1.97
VCPP55072 AC091489.2-201ENST00000566263 604 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC005951.2-201ENST00000576282 495 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.74□□□□□ -1.97
VCPP55072 AL356575.1-201ENST00000603008 283 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC007621.1-201ENST00000604544 437 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC007038.2-201ENST00000608095 740 ntBASIC2.74□□□□□ -1.97
VCPP55072 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.74□□□□□ -1.97
VCPP55072 AC013476.2-201ENST00000614456 459 ntBASIC2.74□□□□□ -1.97
VCPP55072 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.74□□□□□ -1.97
VCPP55072 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.74□□□□□ -1.97
VCPP55072 AC007785.2-201ENST00000598627 1916 ntBASIC2.74□□□□□ -1.97
VCPP55072 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.73□□□□□ -1.97
VCPP55072 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VCPP55072 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
VCPP55072 Y_RNA.560-201ENST00000384689 102 ntBASIC2.73□□□□□ -1.97
VCPP55072 RNA5SP210-201ENST00000391034 120 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms