Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL390237.1-201ENST00000404226 1415 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HMGCS2P54868 SNORD114-1-201ENST00000362705 72 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 RNU5F-7P-201ENST00000363696 115 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 RNA5SP252-201ENST00000391131 119 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AL365338.1-201ENST00000422282 858 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AL353777.1-201ENST00000425552 326 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGCS2P54868 AL591806.2-201ENST00000433122 173 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 NDUFB4P6-201ENST00000436819 366 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGCS2P54868 PGBD4P3-201ENST00000440731 581 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS2P54868 AL592447.1-201ENST00000447592 540 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.71□□□□□ -1.98
HMGCS2P54868 RNA5SP269-201ENST00000459032 137 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS2P54868 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.71□□□□□ -1.98
HMGCS2P54868 AL359273.1-201ENST00000510918 627 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AC008716.1-201ENST00000511084 513 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AC091965.2-201ENST00000512324 613 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 RNU6-798P-201ENST00000516912 103 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 DEFB108D-201ENST00000527787 222 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AC022878.1-201ENST00000530684 149 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGCS2P54868 AC026464.5-201ENST00000562497 722 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGCS2P54868 AL356432.3-201ENST00000568952 465 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AC073544.2-201ENST00000601155 540 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AC068276.1-201ENST00000605793 379 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 BX664608.1-201ENST00000610519 487 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
HMGCS2P54868 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGCS2P54868 AC009878.1-201ENST00000621819 340 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AC009268.2-201ENST00000621925 457 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AC090617.7-201ENST00000623952 126 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AC241585.2-209ENST00000638217 143 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGCS2P54868 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
HMGCS2P54868 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.71□□□□□ -1.98
HMGCS2P54868 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.71□□□□□ -1.98
HMGCS2P54868 MTCO1P9-201ENST00000505577 1534 ntBASIC2.71□□□□□ -1.98
HMGCS2P54868 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.71□□□□□ -1.98
HMGCS2P54868 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
HMGCS2P54868 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGCS2P54868 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
HMGCS2P54868 AC008568.2-201ENST00000623862 2313 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HMGCS2P54868 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
HMGCS2P54868 DEFB108F-201ENST00000344638 222 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 RNU4-91P-201ENST00000364778 135 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HMGCS2P54868 RNU6-76P-201ENST00000384060 104 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 RNU6-297P-201ENST00000384636 107 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 RNY3P10-201ENST00000384764 102 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 RN7SKP142-201ENST00000411236 328 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 RNU6-516P-201ENST00000411381 104 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 SAR1AP4-201ENST00000429225 591 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGCS2P54868 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS2P54868 AL360221.1-201ENST00000445989 335 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 IFNA11P-201ENST00000446352 526 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 MTND1P29-201ENST00000448112 647 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 USP9YP12-201ENST00000450481 570 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 AC234775.1-201ENST00000454247 670 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGCS2P54868 AC092798.1-201ENST00000458542 409 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS2P54868 AC133134.1-201ENST00000466800 359 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGCS2P54868 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGCS2P54868 AC112204.1-201ENST00000502591 103 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS2P54868 ARL4AP2-201ENST00000507378 601 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGCS2P54868 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGCS2P54868 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS2P54868 Y_RNA.695-201ENST00000516715 107 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 AC107934.1-201ENST00000522215 217 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS2P54868 AL133153.1-201ENST00000557756 303 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGCS2P54868 MIR3921-201ENST00000577308 85 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 MIR3118-1-201ENST00000581787 76 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 AC112191.3-201ENST00000604371 277 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 AC067747.1-201ENST00000608026 250 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGCS2P54868 AL603758.1-201ENST00000618654 241 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 AL159972.1-201ENST00000625150 448 ntBASIC2.7□□□□□ -1.98
HMGCS2P54868 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGCS2P54868 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGCS2P54868 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HMGCS2P54868 MTND5P7-201ENST00000413558 1798 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HMGCS2P54868 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
HMGCS2P54868 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HMGCS2P54868 FGF7P2-201ENST00000332473 296 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
HMGCS2P54868 Y_RNA.51-201ENST00000362725 102 ntBASIC2.69□□□□□ -1.98
HMGCS2P54868 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms