Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
LIMK1P53667 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LIMK1P53667 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
LIMK1P53667 MTND5P19-201ENST00000424872 1794 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 FGF7P2-201ENST00000332473 296 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 RNU6-270P-201ENST00000364131 105 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 RN7SKP142-201ENST00000411236 328 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 RPS3AP3-201ENST00000411933 242 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LIMK1P53667 SEPT2P1-201ENST00000419651 180 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 AC099548.1-201ENST00000421443 426 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.03□□□□□ -1.92
LIMK1P53667 AC092047.1-201ENST00000424997 240 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.03□□□□□ -1.92
LIMK1P53667 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.03□□□□□ -1.92
LIMK1P53667 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.03□□□□□ -1.92
LIMK1P53667 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.03□□□□□ -1.92
LIMK1P53667 BNIP3P2-201ENST00000441221 577 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.03□□□□□ -1.92
LIMK1P53667 FDX1P2-201ENST00000450769 375 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 AC108938.1-201ENST00000451204 136 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 MTND1P12-201ENST00000455231 147 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 AC013267.1-201ENST00000458227 267 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.03□□□□□ -1.92
LIMK1P53667 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.03□□□□□ -1.92
LIMK1P53667 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.03□□□□□ -1.92
LIMK1P53667 RNU1-41P-201ENST00000516161 162 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 RNU1-48P-201ENST00000516400 162 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 RPPH1-2P-201ENST00000516688 293 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 RNA5SP337-201ENST00000517007 109 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.03□□□□□ -1.92
LIMK1P53667 AP003122.4-201ENST00000530980 758 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 AP002770.2-201ENST00000543613 532 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.03□□□□□ -1.92
LIMK1P53667 AC012414.6-201ENST00000568241 401 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.03□□□□□ -1.92
LIMK1P53667 uc_338.25-201ENST00000613756 156 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 MIR7843-201ENST00000622274 79 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 Z69908.1-201ENST00000622603 247 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 CU459211.1-201ENST00000635667 749 ntBASIC3.03□□□□□ -1.92
LIMK1P53667 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
LIMK1P53667 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
LIMK1P53667 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LIMK1P53667 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.02□□□□□ -1.93
LIMK1P53667 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.02□□□□□ -1.93
LIMK1P53667 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
LIMK1P53667 RNU6-1167P-201ENST00000363227 94 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 SNORD56.2-201ENST00000363242 71 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 MIR504-201ENST00000385065 83 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 AC007283.2-201ENST00000424739 197 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 AC092427.1-202ENST00000430569 476 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.02□□□□□ -1.93
LIMK1P53667 AC010095.1-201ENST00000443543 144 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 ST13P20-201ENST00000447996 1065 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 RPS15AP27-201ENST00000449183 343 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.02□□□□□ -1.93
LIMK1P53667 RPL31P41-201ENST00000477967 372 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.02□□□□□ -1.93
LIMK1P53667 AC138853.1-201ENST00000503549 823 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.02□□□□□ -1.93
LIMK1P53667 AC117532.1-201ENST00000514638 323 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 RNU7-51P-201ENST00000516560 62 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
LIMK1P53667 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.02□□□□□ -1.93
LIMK1P53667 MIR4524B-201ENST00000581569 115 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 MIR4769-201ENST00000584126 77 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 AL161734.1-201ENST00000609720 557 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.02□□□□□ -1.93
LIMK1P53667 AL158063.1-201ENST00000615349 536 ntBASIC3.02□□□□□ -1.93
LIMK1P53667 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.02□□□□□ -1.93
LIMK1P53667 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.02□□□□□ -1.93
LIMK1P53667 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
LIMK1P53667 CR848007.1-201ENST00000442354 1699 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LIMK1P53667 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LIMK1P53667 AP006437.1-201ENST00000641440 3685 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LIMK1P53667 UBE2L2-201ENST00000254302 429 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 MIR22-201ENST00000362190 85 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 RNU6-512P-201ENST00000364438 103 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 RNU4-91P-201ENST00000364778 135 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LIMK1P53667 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.01□□□□□ -1.93
LIMK1P53667 AC009414.1-201ENST00000427200 443 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.01□□□□□ -1.93
LIMK1P53667 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.01□□□□□ -1.93
LIMK1P53667 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.01□□□□□ -1.93
LIMK1P53667 AC010153.1-201ENST00000432862 727 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 MTND6P13-201ENST00000443510 523 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 MTND2P22-201ENST00000444325 1033 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.01□□□□□ -1.93
LIMK1P53667 AP000936.2-201ENST00000447151 681 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 MTND1P27-201ENST00000451117 902 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 RPL12P25-201ENST00000455592 494 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.01□□□□□ -1.93
LIMK1P53667 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.01□□□□□ -1.93
LIMK1P53667 AC126389.1-201ENST00000477436 290 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 HIGD1AP13-201ENST00000509878 289 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 RNU2-46P-201ENST00000517038 113 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 AP006587.4-201ENST00000526053 529 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms