Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RPL23AP83-201ENST00000434984 473 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 HMGB3P12-201ENST00000438745 556 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCNKAP51800 AC020550.1-201ENST00000447385 163 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCNKAP51800 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCNKAP51800 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCNKAP51800 FGF7P6-202ENST00000451282 293 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCNKAP51800 RNA5SP310-201ENST00000459084 116 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AC006512.1-201ENST00000468816 291 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AC116562.3-201ENST00000506136 177 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AC117522.1-201ENST00000509821 380 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AP006587.4-201ENST00000526053 529 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AC068587.5-201ENST00000528506 175 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AC104383.1-201ENST00000530297 370 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AL355836.1-201ENST00000555951 870 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AL133241.1-201ENST00000556832 487 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCNKAP51800 AC008752.3-201ENST00000588113 712 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.2□□□□□ -1.9
CLCNKAP51800 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.2□□□□□ -1.9
CLCNKAP51800 AC106900.2-201ENST00000604994 317 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CLCNKAP51800 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCNKAP51800 FRG1KP-201ENST00000623592 341 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.2□□□□□ -1.9
CLCNKAP51800 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCNKAP51800 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CLCNKAP51800 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCNKAP51800 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCNKAP51800 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CLCNKAP51800 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
CLCNKAP51800 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLCNKAP51800 AC007496.3-201ENST00000624987 3443 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC073343.1-201ENST00000328239 651 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 DEFB108F-201ENST00000344638 222 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 RNY4P14-201ENST00000363656 96 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 RNU6-960P-201ENST00000364056 120 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 SNORA14A-201ENST00000364773 135 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 RNU6-1283P-201ENST00000365314 105 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLCNKAP51800 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCNKAP51800 Y_RNA.453-201ENST00000384223 109 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 SNORA24.1-201ENST00000384401 135 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 MIR514A1-201ENST00000385133 98 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CLCNKAP51800 RNA5SP229-201ENST00000410809 99 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 RN7SKP140-201ENST00000411196 284 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLCNKAP51800 USP9YP27-201ENST00000418455 438 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 TMEM167AP1-201ENST00000423409 219 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCNKAP51800 RPL27AP8-201ENST00000424277 446 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 MTCO1P20-201ENST00000425366 358 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCNKAP51800 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCNKAP51800 AL590664.1-201ENST00000448065 339 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC125238.1-201ENST00000448842 249 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.19□□□□□ -1.9
CLCNKAP51800 RPS29P15-201ENST00000458329 171 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 MRPS17P3-201ENST00000465453 385 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC104472.2-201ENST00000469035 601 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.19□□□□□ -1.9
CLCNKAP51800 AC126389.1-201ENST00000477436 290 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 RPL30P14-201ENST00000482744 348 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC233702.1-201ENST00000482905 502 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCNKAP51800 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCNKAP51800 FAM92A1P2-202ENST00000504766 877 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCNKAP51800 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCNKAP51800 RNU6-1281P-201ENST00000516223 105 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 SNORA70.16-201ENST00000516390 95 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 SNORA70.24-201ENST00000517233 118 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 OR5B19P-201ENST00000531766 928 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCNKAP51800 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCNKAP51800 AL512310.1-201ENST00000548639 172 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 HMGB1P6-201ENST00000569046 646 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC024619.4-201ENST00000580924 316 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCNKAP51800 AL670379.6-201ENST00000603753 252 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AL670379.11-201ENST00000604059 253 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC008162.1-201ENST00000604718 254 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AL670379.1-201ENST00000604752 252 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AL670379.5-201ENST00000605253 252 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AL670379.12-201ENST00000605291 253 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AL670379.8-201ENST00000605353 252 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AL670379.7-201ENST00000605823 252 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC107294.3-201ENST00000609211 526 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 MIR8057-201ENST00000620957 69 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC005609.4-201ENST00000625071 447 ntBASIC3.19□□□□□ -1.9
CLCNKAP51800 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.19□□□□□ -1.9
CLCNKAP51800 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCNKAP51800 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCNKAP51800 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLCNKAP51800 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLCNKAP51800 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCNKAP51800 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms