Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL391813.2-201ENST00000609113 322 ntBASIC3.07□□□□□ -1.92
CLK1P49759 AC009159.1-201ENST00000618386 642 ntBASIC3.07□□□□□ -1.92
CLK1P49759 AL158801.5-201ENST00000623123 465 ntBASIC3.07□□□□□ -1.92
CLK1P49759 MIR6863-201ENST00000636112 90 ntBASIC3.07□□□□□ -1.92
CLK1P49759 AC093010.3-201ENST00000570269 15214 ntBASIC3.07□□□□□ -1.92
CLK1P49759 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLK1P49759 AL138713.1-201ENST00000624026 2130 ntBASIC3.07□□□□□ -1.92
CLK1P49759 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.06□□□□□ -1.92
CLK1P49759 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.06□□□□□ -1.92
CLK1P49759 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.06□□□□□ -1.92
CLK1P49759 RNU6-223P-201ENST00000362830 107 ntBASIC3.06□□□□□ -1.92
CLK1P49759 Y_RNA.296-201ENST00000364930 108 ntBASIC3.06□□□□□ -1.92
CLK1P49759 RNU6-867P-201ENST00000364956 107 ntBASIC3.06□□□□□ -1.92
CLK1P49759 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CLK1P49759 RNU6-1103P-201ENST00000384150 107 ntBASIC3.06□□□□□ -1.92
CLK1P49759 RNU6-140P-201ENST00000384566 108 ntBASIC3.06□□□□□ -1.92
CLK1P49759 FCF1P10-201ENST00000407590 479 ntBASIC3.06□□□□□ -1.92
CLK1P49759 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.06□□□□□ -1.92
CLK1P49759 USP9YP6-201ENST00000413550 854 ntBASIC3.06□□□□□ -1.92
CLK1P49759 MTND3P17-201ENST00000416968 344 ntBASIC3.06□□□□□ -1.92
CLK1P49759 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.06□□□□□ -1.92
CLK1P49759 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLK1P49759 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.06□□□□□ -1.92
CLK1P49759 AL353777.1-201ENST00000425552 326 ntBASIC3.06□□□□□ -1.92
CLK1P49759 ISCA1P6-201ENST00000427740 390 ntBASIC3.06□□□□□ -1.92
CLK1P49759 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.06□□□□□ -1.92
CLK1P49759 RPL22P17-201ENST00000438729 315 ntBASIC3.06□□□□□ -1.92
CLK1P49759 DPPA3P1-201ENST00000448050 469 ntBASIC3.06□□□□□ -1.92
CLK1P49759 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.06□□□□□ -1.92
CLK1P49759 MRPS17P3-201ENST00000465453 385 ntBASIC3.06□□□□□ -1.92
CLK1P49759 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
CLK1P49759 RNU1-143P-201ENST00000516296 146 ntBASIC3.06□□□□□ -1.92
CLK1P49759 IGKV2-26-201ENST00000518305 343 ntBASIC3.06□□□□□ -1.92
CLK1P49759 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.06□□□□□ -1.92
CLK1P49759 AC123904.2-201ENST00000548059 300 ntBASIC3.06□□□□□ -1.92
CLK1P49759 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.06□□□□□ -1.92
CLK1P49759 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.06□□□□□ -1.92
CLK1P49759 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.06□□□□□ -1.92
CLK1P49759 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.06□□□□□ -1.92
CLK1P49759 MIR3682-201ENST00000581338 84 ntBASIC3.06□□□□□ -1.92
CLK1P49759 NRBF2P1-201ENST00000587407 859 ntBASIC3.06□□□□□ -1.92
CLK1P49759 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.06□□□□□ -1.92
CLK1P49759 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.06□□□□□ -1.92
CLK1P49759 U1.23-201ENST00000610293 146 ntBASIC3.06□□□□□ -1.92
CLK1P49759 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CLK1P49759 RNU1-68P-201ENST00000615382 146 ntBASIC3.06□□□□□ -1.92
CLK1P49759 AL355365.1-201ENST00000616480 294 ntBASIC3.06□□□□□ -1.92
CLK1P49759 U6.42-201ENST00000618440 107 ntBASIC3.06□□□□□ -1.92
CLK1P49759 U1.39-201ENST00000621562 146 ntBASIC3.06□□□□□ -1.92
CLK1P49759 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLK1P49759 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.06□□□□□ -1.92
CLK1P49759 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
CLK1P49759 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
CLK1P49759 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLK1P49759 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLK1P49759 MTND5P33-201ENST00000571250 1450 ntBASIC3.05□□□□□ -1.92
CLK1P49759 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLK1P49759 RNU4-35P-201ENST00000362588 141 ntBASIC3.05□□□□□ -1.92
CLK1P49759 RNA5SP119-201ENST00000362715 117 ntBASIC3.05□□□□□ -1.92
CLK1P49759 U3.6-201ENST00000363622 211 ntBASIC3.05□□□□□ -1.92
CLK1P49759 RNU4-1-201ENST00000363925 141 ntBASIC3.05□□□□□ -1.92
CLK1P49759 RNU6-1207P-201ENST00000384343 107 ntBASIC3.05□□□□□ -1.92
CLK1P49759 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CLK1P49759 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.05□□□□□ -1.92
CLK1P49759 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLK1P49759 MIR888-201ENST00000401186 77 ntBASIC3.05□□□□□ -1.92
CLK1P49759 CCNG1P1-201ENST00000406783 885 ntBASIC3.05□□□□□ -1.92
CLK1P49759 RNU4-55P-201ENST00000410731 137 ntBASIC3.05□□□□□ -1.92
CLK1P49759 RN7SKP58-201ENST00000411010 305 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AL513331.1-201ENST00000411908 397 ntBASIC3.05□□□□□ -1.92
CLK1P49759 Z99755.1-201ENST00000414048 380 ntBASIC3.05□□□□□ -1.92
CLK1P49759 BMS1P22-201ENST00000414726 313 ntBASIC3.05□□□□□ -1.92
CLK1P49759 PIGFP2-201ENST00000421400 651 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLK1P49759 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.05□□□□□ -1.92
CLK1P49759 AC073464.1-201ENST00000429823 534 ntBASIC3.05□□□□□ -1.92
CLK1P49759 RPL31P35-201ENST00000431058 377 ntBASIC3.05□□□□□ -1.92
CLK1P49759 MTCO2P11-201ENST00000431069 680 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AC104850.1-201ENST00000435940 476 ntBASIC3.05□□□□□ -1.92
CLK1P49759 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AC005019.1-201ENST00000436455 431 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.05□□□□□ -1.92
CLK1P49759 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.05□□□□□ -1.92
CLK1P49759 C1DP4-201ENST00000455429 424 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.05□□□□□ -1.92
CLK1P49759 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.05□□□□□ -1.92
CLK1P49759 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.05□□□□□ -1.92
CLK1P49759 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.05□□□□□ -1.92
CLK1P49759 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.05□□□□□ -1.92
CLK1P49759 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.05□□□□□ -1.92
CLK1P49759 APOOP4-201ENST00000513530 597 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AP001893.2-201ENST00000526949 202 ntBASIC3.05□□□□□ -1.92
CLK1P49759 FAM92A1P1-201ENST00000528023 890 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.05□□□□□ -1.92
CLK1P49759 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.05□□□□□ -1.92
CLK1P49759 MIR548S-201ENST00000581352 82 ntBASIC3.05□□□□□ -1.92
CLK1P49759 HMGN2P15-201ENST00000585707 270 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AC024153.1-201ENST00000603103 365 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AL391646.1-201ENST00000603860 190 ntBASIC3.05□□□□□ -1.92
CLK1P49759 AL161756.2-201ENST00000604597 246 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms