Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX1P48742 AC079600.2-201ENST00000550076 130 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AC087883.1-201ENST00000551882 391 ntBASIC2.95□□□□□ -1.94
LHX1P48742 MIR3167-201ENST00000579623 85 ntBASIC2.95□□□□□ -1.94
LHX1P48742 GLUD1P4-201ENST00000590914 418 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX1P48742 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX1P48742 AC098826.3-201ENST00000603823 466 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AC136601.2-201ENST00000604356 474 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AC004832.5-201ENST00000608677 401 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AC006566.1-201ENST00000608943 513 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AC109347.2-201ENST00000610220 349 ntBASIC2.95□□□□□ -1.94
LHX1P48742 AC007998.5-201ENST00000622938 237 ntBASIC2.95□□□□□ -1.94
LHX1P48742 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LHX1P48742 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.94□□□□□ -1.94
LHX1P48742 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
LHX1P48742 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LHX1P48742 AC073343.1-201ENST00000328239 651 ntBASIC2.94□□□□□ -1.94
LHX1P48742 RPL9P7-201ENST00000330965 580 ntBASIC2.94□□□□□ -1.94
LHX1P48742 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
LHX1P48742 RNU6-188P-201ENST00000364207 107 ntBASIC2.94□□□□□ -1.94
LHX1P48742 AL360182.1-201ENST00000397433 468 ntBASIC2.94□□□□□ -1.94
LHX1P48742 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.94□□□□□ -1.94
LHX1P48742 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.94□□□□□ -1.94
LHX1P48742 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.94□□□□□ -1.94
LHX1P48742 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.94□□□□□ -1.94
LHX1P48742 AC099548.1-201ENST00000421443 426 ntBASIC2.94□□□□□ -1.94
LHX1P48742 RPL31P35-201ENST00000431058 377 ntBASIC2.94□□□□□ -1.94
LHX1P48742 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.94□□□□□ -1.94
LHX1P48742 MTND4P25-201ENST00000441039 533 ntBASIC2.94□□□□□ -1.94
LHX1P48742 KLF3P2-201ENST00000465138 268 ntBASIC2.94□□□□□ -1.94
LHX1P48742 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.94□□□□□ -1.94
LHX1P48742 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LHX1P48742 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.94□□□□□ -1.94
LHX1P48742 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.94□□□□□ -1.94
LHX1P48742 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.94□□□□□ -1.94
LHX1P48742 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.94□□□□□ -1.94
LHX1P48742 AC012213.3-201ENST00000577199 777 ntBASIC2.94□□□□□ -1.94
LHX1P48742 MIR3913-1-201ENST00000577744 102 ntBASIC2.94□□□□□ -1.94
LHX1P48742 MIR4528-201ENST00000577763 90 ntBASIC2.94□□□□□ -1.94
LHX1P48742 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.94□□□□□ -1.94
LHX1P48742 MIR3605-201ENST00000583214 100 ntBASIC2.94□□□□□ -1.94
LHX1P48742 MIR3611-201ENST00000584484 83 ntBASIC2.94□□□□□ -1.94
LHX1P48742 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.94□□□□□ -1.94
LHX1P48742 AC245014.2-201ENST00000603689 287 ntBASIC2.94□□□□□ -1.94
LHX1P48742 AC104763.2-201ENST00000604179 382 ntBASIC2.94□□□□□ -1.94
LHX1P48742 AL161798.1-201ENST00000604630 131 ntBASIC2.94□□□□□ -1.94
LHX1P48742 AC246785.4-201ENST00000605374 287 ntBASIC2.94□□□□□ -1.94
LHX1P48742 MIR98-201ENST00000606724 119 ntBASIC2.94□□□□□ -1.94
LHX1P48742 AC107294.1-201ENST00000609524 467 ntBASIC2.94□□□□□ -1.94
LHX1P48742 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LHX1P48742 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.94□□□□□ -1.94
LHX1P48742 AP003399.1-201ENST00000637534 361 ntBASIC2.94□□□□□ -1.94
LHX1P48742 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LHX1P48742 AP003122.5-201ENST00000527668 3766 ntBASIC2.94□□□□□ -1.94
LHX1P48742 MTND5P19-201ENST00000424872 1794 ntBASIC2.94□□□□□ -1.94
LHX1P48742 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LHX1P48742 MTND5P29-201ENST00000458676 1807 ntBASIC2.93□□□□□ -1.94
LHX1P48742 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LHX1P48742 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LHX1P48742 FTLP6-201ENST00000355274 422 ntBASIC2.93□□□□□ -1.94
LHX1P48742 RNU4-40P-201ENST00000364351 143 ntBASIC2.93□□□□□ -1.94
LHX1P48742 RNU6-512P-201ENST00000364438 103 ntBASIC2.93□□□□□ -1.94
LHX1P48742 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.93□□□□□ -1.94
LHX1P48742 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.93□□□□□ -1.94
LHX1P48742 RNU6-198P-201ENST00000384258 104 ntBASIC2.93□□□□□ -1.94
LHX1P48742 RNU6-14P-201ENST00000384630 106 ntBASIC2.93□□□□□ -1.94
LHX1P48742 RNU6-817P-201ENST00000391083 104 ntBASIC2.93□□□□□ -1.94
LHX1P48742 AL592148.1-201ENST00000413568 445 ntBASIC2.93□□□□□ -1.94
LHX1P48742 CDK8P2-201ENST00000415020 547 ntBASIC2.93□□□□□ -1.94
LHX1P48742 BX295541.1-201ENST00000417774 250 ntBASIC2.93□□□□□ -1.94
LHX1P48742 HSPE1P1-201ENST00000421494 318 ntBASIC2.93□□□□□ -1.94
LHX1P48742 AC063976.3-201ENST00000426849 329 ntBASIC2.93□□□□□ -1.94
LHX1P48742 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.93□□□□□ -1.94
LHX1P48742 MTND1P29-201ENST00000448112 647 ntBASIC2.93□□□□□ -1.94
LHX1P48742 RNU6-953P-201ENST00000459154 107 ntBASIC2.93□□□□□ -1.94
LHX1P48742 RPS26P21-201ENST00000475397 348 ntBASIC2.93□□□□□ -1.94
LHX1P48742 AC138853.1-201ENST00000503549 823 ntBASIC2.93□□□□□ -1.94
LHX1P48742 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.93□□□□□ -1.94
LHX1P48742 AC079140.3-201ENST00000511111 550 ntBASIC2.93□□□□□ -1.94
LHX1P48742 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.93□□□□□ -1.94
LHX1P48742 RNU6-1220P-201ENST00000517126 108 ntBASIC2.93□□□□□ -1.94
LHX1P48742 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LHX1P48742 AC090136.1-201ENST00000520009 240 ntBASIC2.93□□□□□ -1.94
LHX1P48742 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.93□□□□□ -1.94
LHX1P48742 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.93□□□□□ -1.94
LHX1P48742 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LHX1P48742 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.93□□□□□ -1.94
LHX1P48742 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.93□□□□□ -1.94
LHX1P48742 AC068135.2-201ENST00000569293 1028 ntBASIC2.93□□□□□ -1.94
LHX1P48742 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.93□□□□□ -1.94
LHX1P48742 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.93□□□□□ -1.94
LHX1P48742 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.93□□□□□ -1.94
LHX1P48742 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.93□□□□□ -1.94
LHX1P48742 FTX_3.1-201ENST00000610451 147 ntBASIC2.93□□□□□ -1.94
LHX1P48742 AC072046.2-201ENST00000618366 268 ntBASIC2.93□□□□□ -1.94
LHX1P48742 MAPK10-322ENST00000641485 4530 ntBASIC2.93□□□□□ -1.94
LHX1P48742 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.93□□□□□ -1.94
LHX1P48742 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LHX1P48742 AC008264.2-201ENST00000610193 3731 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms