Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU6-700P-201ENST00000391043 107 ntBASIC0.49□□□□□ -2.33
HTTP42858 HSPE1P22-201ENST00000456856 327 ntBASIC0.49□□□□□ -2.33
HTTP42858 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.49□□□□□ -2.33
HTTP42858 AC074051.3-201ENST00000570238 358 ntBASIC0.49□□□□□ -2.33
HTTP42858 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.49□□□□□ -2.33
HTTP42858 AC025768.1-201ENST00000510057 267 ntBASIC0.49□□□□□ -2.33
HTTP42858 RNU6-347P-201ENST00000516658 105 ntBASIC0.49□□□□□ -2.33
HTTP42858 AC025857.1-201ENST00000525252 377 ntBASIC0.49□□□□□ -2.33
HTTP42858 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.49□□□□□ -2.33
HTTP42858 AC136932.1-201ENST00000574771 208 ntBASIC0.49□□□□□ -2.33
HTTP42858 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.49□□□□□ -2.33
HTTP42858 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.49□□□□□ -2.33
HTTP42858 AC073111.2-201ENST00000605657 1075 ntBASIC0.49□□□□□ -2.33
HTTP42858 Z82195.2-201ENST00000612348 18351 ntBASIC0.48□□□□□ -2.33
HTTP42858 AL356473.1-201ENST00000406203 1408 ntBASIC0.48□□□□□ -2.33
HTTP42858 RNU6-50P-201ENST00000362356 103 ntBASIC0.48□□□□□ -2.33
HTTP42858 RNU4-73P-201ENST00000363164 141 ntBASIC0.48□□□□□ -2.33
HTTP42858 SNORA8.3-201ENST00000384679 139 ntBASIC0.48□□□□□ -2.33
HTTP42858 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.48□□□□□ -2.33
HTTP42858 HSBP1P1-201ENST00000555205 166 ntBASIC0.48□□□□□ -2.33
HTTP42858 MZT1P2-201ENST00000604387 248 ntBASIC0.48□□□□□ -2.33
HTTP42858 NUTF2P8-201ENST00000604593 363 ntBASIC0.48□□□□□ -2.33
HTTP42858 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.48□□□□□ -2.33
HTTP42858 AL589935.2-201ENST00000616471 1231 ntBASIC0.48□□□□□ -2.33
HTTP42858 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.48□□□□□ -2.33
HTTP42858 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HTTP42858 RNU6-1180P-201ENST00000364935 107 ntBASIC0.48□□□□□ -2.33
HTTP42858 SNORA4.3-201ENST00000365564 137 ntBASIC0.48□□□□□ -2.33
HTTP42858 AC013268.2-201ENST00000420753 337 ntBASIC0.48□□□□□ -2.33
HTTP42858 SNORD84-203ENST00000584275 78 ntBASIC0.48□□□□□ -2.33
HTTP42858 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.48□□□□□ -2.33
HTTP42858 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
HTTP42858 AC006249.1-201ENST00000621223 471 ntBASIC0.48□□□□□ -2.33
HTTP42858 RNU6-1181P-201ENST00000384191 106 ntBASIC0.47□□□□□ -2.33
HTTP42858 AL356432.1-201ENST00000405809 419 ntBASIC0.47□□□□□ -2.33
HTTP42858 RSL24D1P8-201ENST00000434442 492 ntBASIC0.47□□□□□ -2.33
HTTP42858 RRN3P3-201ENST00000549207 578 ntBASIC0.47□□□□□ -2.33
HTTP42858 SNRPGP17-201ENST00000603780 214 ntBASIC0.47□□□□□ -2.33
HTTP42858 ZNF519P1-201ENST00000449011 1626 ntBASIC0.47□□□□□ -2.33
HTTP42858 Y_RNA.35-201ENST00000362601 101 ntBASIC0.47□□□□□ -2.33
HTTP42858 SNORA16B-201ENST00000364674 135 ntBASIC0.47□□□□□ -2.33
HTTP42858 MIR146A-201ENST00000385201 99 ntBASIC0.47□□□□□ -2.33
HTTP42858 AC241520.1-201ENST00000422654 1099 ntBASIC0.47□□□□□ -2.33
HTTP42858 RPS25P9-201ENST00000435591 252 ntBASIC0.47□□□□□ -2.33
HTTP42858 RABEPKP1-201ENST00000440529 1026 ntBASIC0.47□□□□□ -2.33
HTTP42858 HMGN2P21-201ENST00000447764 270 ntBASIC0.47□□□□□ -2.33
HTTP42858 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.47□□□□□ -2.33
HTTP42858 AL160236.1-201ENST00000556317 195 ntBASIC0.47□□□□□ -2.33
HTTP42858 AL357075.2-201ENST00000614906 189 ntBASIC0.47□□□□□ -2.33
HTTP42858 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.47□□□□□ -2.33
HTTP42858 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.47□□□□□ -2.33
HTTP42858 AC131280.1-202ENST00000624067 4211 ntBASIC0.47□□□□□ -2.33
HTTP42858 SNORD26-201ENST00000384147 75 ntBASIC0.47□□□□□ -2.33
HTTP42858 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
HTTP42858 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.47□□□□□ -2.33
HTTP42858 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.47□□□□□ -2.33
HTTP42858 SSXP4-201ENST00000451349 245 ntBASIC0.47□□□□□ -2.33
HTTP42858 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.47□□□□□ -2.33
HTTP42858 MIR4493-201ENST00000584016 73 ntBASIC0.47□□□□□ -2.33
HTTP42858 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.47□□□□□ -2.33
HTTP42858 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.47□□□□□ -2.33
HTTP42858 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HTTP42858 Y_RNA.25-201ENST00000362528 102 ntBASIC0.46□□□□□ -2.34
HTTP42858 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HTTP42858 RNA5SP468-201ENST00000516782 93 ntBASIC0.46□□□□□ -2.34
HTTP42858 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.46□□□□□ -2.34
HTTP42858 SYF2P1-201ENST00000550658 413 ntBASIC0.46□□□□□ -2.34
HTTP42858 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.46□□□□□ -2.34
HTTP42858 AL096840.1-201ENST00000603287 93 ntBASIC0.46□□□□□ -2.34
HTTP42858 AC108676.2-201ENST00000605225 163 ntBASIC0.46□□□□□ -2.34
HTTP42858 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HTTP42858 MIR92A1-201ENST00000385233 78 ntBASIC0.46□□□□□ -2.34
HTTP42858 MRPL35P1-201ENST00000404272 572 ntBASIC0.46□□□□□ -2.34
HTTP42858 CIR1P3-201ENST00000405137 479 ntBASIC0.46□□□□□ -2.34
HTTP42858 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HTTP42858 TPT1P8-201ENST00000510120 555 ntBASIC0.46□□□□□ -2.34
HTTP42858 RNU1-61P-201ENST00000516107 151 ntBASIC0.46□□□□□ -2.34
HTTP42858 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.46□□□□□ -2.34
HTTP42858 AL592148.2-201ENST00000612210 372 ntBASIC0.46□□□□□ -2.34
HTTP42858 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.45□□□□□ -2.34
HTTP42858 Z80107.1-201ENST00000436830 412 ntBASIC0.45□□□□□ -2.34
HTTP42858 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.45□□□□□ -2.34
HTTP42858 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.45□□□□□ -2.34
HTTP42858 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HTTP42858 RNU4-57P-201ENST00000515980 135 ntBASIC0.45□□□□□ -2.34
HTTP42858 MTCYBP23-201ENST00000558717 1102 ntBASIC0.45□□□□□ -2.34
HTTP42858 LLPHP1-201ENST00000603571 367 ntBASIC0.45□□□□□ -2.34
HTTP42858 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.45□□□□□ -2.34
HTTP42858 SDR42E1P2-201ENST00000614861 481 ntBASIC0.45□□□□□ -2.34
HTTP42858 SDR42E1P4-201ENST00000620894 481 ntBASIC0.45□□□□□ -2.34
HTTP42858 AC132825.8-201ENST00000640783 297 ntBASIC0.45□□□□□ -2.34
HTTP42858 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.45□□□□□ -2.34
HTTP42858 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HTTP42858 AL161449.1-201ENST00000414531 1199 ntBASIC0.45□□□□□ -2.34
HTTP42858 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.45□□□□□ -2.34
HTTP42858 SNORA3.4-201ENST00000515969 96 ntBASIC0.45□□□□□ -2.34
HTTP42858 OR5AL2P-201ENST00000532185 920 ntBASIC0.45□□□□□ -2.34
HTTP42858 MIR3690-201ENST00000580266 75 ntBASIC0.45□□□□□ -2.34
HTTP42858 AC009220.3-201ENST00000604318 586 ntBASIC0.45□□□□□ -2.34
HTTP42858 MIR101-1-201ENST00000362265 75 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms