Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AL445984.1-201ENST00000637834 659 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TNFSF9P41273 AL137003.2-201ENST00000606924 2538 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 AC010889.1-201ENST00000566193 2666 ntBASIC2.15□□□□□ -2.06
TNFSF9P41273 CKAP2P1-201ENST00000555477 2049 ntBASIC2.15□□□□□ -2.06
TNFSF9P41273 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
TNFSF9P41273 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.15□□□□□ -2.07
TNFSF9P41273 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TNFSF9P41273 Y_RNA.245-201ENST00000364493 95 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 SNORA67.1-201ENST00000364749 141 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 MIR218-1-201ENST00000384999 110 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.15□□□□□ -2.07
TNFSF9P41273 SEPT2P1-201ENST00000419651 180 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 BPY2DP-201ENST00000422208 265 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 AC010153.1-201ENST00000432862 727 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.15□□□□□ -2.07
TNFSF9P41273 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.15□□□□□ -2.07
TNFSF9P41273 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.15□□□□□ -2.07
TNFSF9P41273 MTCO3P45-201ENST00000443036 613 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.15□□□□□ -2.07
TNFSF9P41273 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.15□□□□□ -2.07
TNFSF9P41273 CECR9-201ENST00000453421 199 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.15□□□□□ -2.07
TNFSF9P41273 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.15□□□□□ -2.07
TNFSF9P41273 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.15□□□□□ -2.07
TNFSF9P41273 RPS27AP10-201ENST00000496103 208 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.15□□□□□ -2.07
TNFSF9P41273 AC023141.11-201ENST00000508864 202 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 AC109445.1-201ENST00000512356 383 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 MTND5P13-201ENST00000513046 1079 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 SNORA31.11-201ENST00000516528 139 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 BTF3P12-201ENST00000519620 469 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.15□□□□□ -2.07
TNFSF9P41273 MTCO2P15-201ENST00000532655 656 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.15□□□□□ -2.07
TNFSF9P41273 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.15□□□□□ -2.07
TNFSF9P41273 AC103710.2-201ENST00000609912 942 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.15□□□□□ -2.07
TNFSF9P41273 AC109809.1-201ENST00000619665 545 ntBASIC2.15□□□□□ -2.07
TNFSF9P41273 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.15□□□□□ -2.07
TNFSF9P41273 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.07
TNFSF9P41273 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TNFSF9P41273 RNU6-220P-201ENST00000390919 107 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TNFSF9P41273 CCNG1P1-201ENST00000406783 885 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 MIR320C1-201ENST00000408566 88 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFSF9P41273 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.14□□□□□ -2.07
TNFSF9P41273 USP12PX-201ENST00000432383 1057 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.14□□□□□ -2.07
TNFSF9P41273 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.14□□□□□ -2.07
TNFSF9P41273 AC009961.3-201ENST00000449832 765 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFSF9P41273 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFSF9P41273 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AC134050.1-201ENST00000495088 933 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 UBE2V1P12-201ENST00000503954 474 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AC079395.1-201ENST00000510981 262 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AC110760.3-202ENST00000515177 371 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFSF9P41273 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.14□□□□□ -2.07
TNFSF9P41273 AC023538.1-201ENST00000534576 736 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFSF9P41273 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFSF9P41273 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFSF9P41273 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFSF9P41273 MIR3199-1-201ENST00000582434 88 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AC009977.1-201ENST00000586015 570 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.14□□□□□ -2.07
TNFSF9P41273 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFSF9P41273 AC009314.1-201ENST00000603871 304 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AC245297.2-201ENST00000610119 565 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AL133445.2-201ENST00000611191 527 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AC005332.10-201ENST00000612725 619 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AC107075.1-201ENST00000613695 314 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AL078595.3-201ENST00000623815 1166 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AC112204.3-201ENST00000623822 332 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.14□□□□□ -2.07
TNFSF9P41273 MIR3199-2-201ENST00000636243 86 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 AC099654.9-201ENST00000637055 678 ntBASIC2.14□□□□□ -2.07
TNFSF9P41273 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TNFSF9P41273 DDX43P2-201ENST00000604753 1354 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TNFSF9P41273 RNU6-1083P-201ENST00000384022 107 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 SNORA80E-201ENST00000384744 137 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 RNU6-482P-201ENST00000391068 107 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 AL136310.1-201ENST00000404926 654 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.13□□□□□ -2.07
TNFSF9P41273 RPL21P24-201ENST00000413752 448 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 AC096649.2-201ENST00000416186 393 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.13□□□□□ -2.07
TNFSF9P41273 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TNFSF9P41273 HMGB1P9-201ENST00000429856 646 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 RPS25P9-201ENST00000435591 252 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 MTCO2P20-201ENST00000437339 673 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 AC104058.1-201ENST00000448028 297 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 USP9YP25-201ENST00000457708 443 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 RNU6-717P-201ENST00000459076 104 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms