Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.82□□□□□ -2.12
COL18A1P39060 AL356057.2-201ENST00000403318 432 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 BTF3P8-201ENST00000414577 526 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.82□□□□□ -2.12
COL18A1P39060 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AL445669.1-201ENST00000426743 755 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AL590383.1-201ENST00000428602 75 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 MTCO1P3-201ENST00000429327 192 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 MTCYBP42-201ENST00000444653 1130 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL18A1P39060 AC026414.1-201ENST00000504046 698 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 LTV1P1-201ENST00000510683 1237 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AP003355.1-201ENST00000518956 587 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.82□□□□□ -2.12
COL18A1P39060 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.82□□□□□ -2.12
COL18A1P39060 AC016957.1-201ENST00000534895 309 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AC087894.1-201ENST00000538359 518 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.82□□□□□ -2.12
COL18A1P39060 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL18A1P39060 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 MIR3912-201ENST00000577566 105 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.82□□□□□ -2.12
COL18A1P39060 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.82□□□□□ -2.12
COL18A1P39060 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.82□□□□□ -2.12
COL18A1P39060 AC006213.4-201ENST00000616184 634 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
COL18A1P39060 AC107982.1-201ENST00000507171 1300 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AL596028.1-201ENST00000326971 197 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
COL18A1P39060 MIR320A-201ENST00000385302 82 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 RPS6P15-201ENST00000431996 751 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.82□□□□□ -2.12
COL18A1P39060 MTND4P6-201ENST00000438297 472 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 THAP5P1-201ENST00000439089 262 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 OR10R1P-201ENST00000441524 1141 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.82□□□□□ -2.12
COL18A1P39060 RPL21P134-201ENST00000453468 483 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AC008427.1-201ENST00000503102 655 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AC147055.4-201ENST00000504399 745 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AC114322.1-201ENST00000506771 926 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 RNA5SP82-201ENST00000516707 92 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AC023813.2-201ENST00000564321 469 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AC011451.2-201ENST00000604303 598 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.82□□□□□ -2.12
COL18A1P39060 AL161734.1-201ENST00000609720 557 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AC124016.2-201ENST00000610058 665 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AC018926.1-201ENST00000616335 435 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 AC073592.7-201ENST00000623659 507 ntBASIC1.82□□□□□ -2.12
COL18A1P39060 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL18A1P39060 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
COL18A1P39060 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
COL18A1P39060 Y_RNA.110-201ENST00000363220 99 ntBASIC1.81□□□□□ -2.12
COL18A1P39060 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
COL18A1P39060 RNU2-42P-201ENST00000410697 113 ntBASIC1.81□□□□□ -2.12
COL18A1P39060 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.81□□□□□ -2.12
COL18A1P39060 USP9YP22-201ENST00000438971 294 ntBASIC1.81□□□□□ -2.12
COL18A1P39060 AC005297.2-201ENST00000450430 606 ntBASIC1.81□□□□□ -2.12
COL18A1P39060 COX6CP14-201ENST00000469580 174 ntBASIC1.81□□□□□ -2.12
COL18A1P39060 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.81□□□□□ -2.12
COL18A1P39060 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.81□□□□□ -2.12
COL18A1P39060 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.81□□□□□ -2.12
COL18A1P39060 RN7SKP49-201ENST00000516675 260 ntBASIC1.81□□□□□ -2.12
COL18A1P39060 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.81□□□□□ -2.12
COL18A1P39060 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.81□□□□□ -2.12
COL18A1P39060 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.81□□□□□ -2.12
COL18A1P39060 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.81□□□□□ -2.12
COL18A1P39060 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.81□□□□□ -2.12
COL18A1P39060 AC090615.1-201ENST00000577519 154 ntBASIC1.81□□□□□ -2.12
COL18A1P39060 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.81□□□□□ -2.12
COL18A1P39060 AC004853.1-201ENST00000604902 698 ntBASIC1.81□□□□□ -2.12
COL18A1P39060 MIR6130-201ENST00000619419 109 ntBASIC1.81□□□□□ -2.12
COL18A1P39060 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.81□□□□□ -2.12
COL18A1P39060 AC121333.1-201ENST00000567488 2709 ntBASIC1.81□□□□□ -2.12
COL18A1P39060 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL18A1P39060 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
COL18A1P39060 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
COL18A1P39060 RNU6-1035P-201ENST00000384477 107 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 AC092047.1-201ENST00000424997 240 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 TAAR7P-201ENST00000436141 242 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 AL714022.1-201ENST00000439897 151 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.8□□□□□ -2.12
COL18A1P39060 MTND4LP3-201ENST00000468320 276 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 AC116337.2-201ENST00000477662 156 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL18A1P39060 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.8□□□□□ -2.12
COL18A1P39060 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.8□□□□□ -2.12
COL18A1P39060 AP003033.1-201ENST00000527244 415 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.8□□□□□ -2.12
COL18A1P39060 AC005498.1-201ENST00000592125 465 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 AL022067.1-201ENST00000602426 454 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 MIR6078-201ENST00000611069 100 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.8□□□□□ -2.12
COL18A1P39060 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.8□□□□□ -2.12
COL18A1P39060 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
COL18A1P39060 AL079342.2-201ENST00000403367 482 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.8□□□□□ -2.12
COL18A1P39060 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.8□□□□□ -2.12
COL18A1P39060 NDUFB4P7-201ENST00000423198 363 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 AC013262.1-201ENST00000426710 252 ntBASIC1.8□□□□□ -2.12
COL18A1P39060 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms