Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 MIR153-1-201ENST00000384914 90 ntBASIC4.93□□□□□ -1.62
GPC1P35052 SNORA40C-201ENST00000391285 128 ntBASIC4.93□□□□□ -1.62
GPC1P35052 AC009804.1-201ENST00000400949 179 ntBASIC4.93□□□□□ -1.62
GPC1P35052 RPL23AP26-201ENST00000412728 464 ntBASIC4.93□□□□□ -1.62
GPC1P35052 RAB9AP3-201ENST00000412737 573 ntBASIC4.93□□□□□ -1.62
GPC1P35052 RPS29P10-201ENST00000439197 166 ntBASIC4.93□□□□□ -1.62
GPC1P35052 CYCSP32-201ENST00000440548 321 ntBASIC4.93□□□□□ -1.62
GPC1P35052 IFNA11P-201ENST00000446352 526 ntBASIC4.93□□□□□ -1.62
GPC1P35052 BTF3P6-201ENST00000448054 499 ntBASIC4.93□□□□□ -1.62
GPC1P35052 RAB9AP1-201ENST00000449393 573 ntBASIC4.93□□□□□ -1.62
GPC1P35052 AC092798.1-201ENST00000458542 409 ntBASIC4.93□□□□□ -1.62
GPC1P35052 RPS4XP22-201ENST00000480755 780 ntBASIC4.93□□□□□ -1.62
GPC1P35052 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.93□□□□□ -1.62
GPC1P35052 BTF3L4P4-201ENST00000506381 449 ntBASIC4.93□□□□□ -1.62
GPC1P35052 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.93□□□□□ -1.62
GPC1P35052 SNORD116-25-201ENST00000516517 92 ntBASIC4.93□□□□□ -1.62
GPC1P35052 AC006349.1-201ENST00000555526 235 ntBASIC4.93□□□□□ -1.62
GPC1P35052 NDUFB4P11-201ENST00000560510 395 ntBASIC4.93□□□□□ -1.62
GPC1P35052 SNORD95-201ENST00000579879 68 ntBASIC4.93□□□□□ -1.62
GPC1P35052 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.93□□□□□ -1.62
GPC1P35052 AL109809.4-201ENST00000603520 2185 ntBASIC4.93□□□□□ -1.62
GPC1P35052 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.93□□□□□ -1.62
GPC1P35052 MIR6886-201ENST00000619864 61 ntBASIC4.93□□□□□ -1.62
GPC1P35052 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.93□□□□□ -1.62
GPC1P35052 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.93□□□□□ -1.62
GPC1P35052 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
GPC1P35052 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
GPC1P35052 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
GPC1P35052 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GPC1P35052 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.92□□□□□ -1.62
GPC1P35052 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.92□□□□□ -1.62
GPC1P35052 RNU6-527P-201ENST00000363425 104 ntBASIC4.92□□□□□ -1.62
GPC1P35052 RNU6-961P-201ENST00000363893 105 ntBASIC4.92□□□□□ -1.62
GPC1P35052 RNA5SP242-201ENST00000364171 118 ntBASIC4.92□□□□□ -1.62
GPC1P35052 Y_RNA.261-201ENST00000364631 102 ntBASIC4.92□□□□□ -1.62
GPC1P35052 RNU6-215P-201ENST00000365169 102 ntBASIC4.92□□□□□ -1.62
GPC1P35052 Y_RNA.353-201ENST00000365440 108 ntBASIC4.92□□□□□ -1.62
GPC1P35052 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GPC1P35052 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.92□□□□□ -1.62
GPC1P35052 Y_RNA.571-201ENST00000384753 98 ntBASIC4.92□□□□□ -1.62
GPC1P35052 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
GPC1P35052 RNA5SP339-201ENST00000390987 122 ntBASIC4.92□□□□□ -1.62
GPC1P35052 RNA5SP44-201ENST00000410446 133 ntBASIC4.92□□□□□ -1.62
GPC1P35052 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.92□□□□□ -1.62
GPC1P35052 AL035461.1-201ENST00000421490 332 ntBASIC4.92□□□□□ -1.62
GPC1P35052 AC007919.1-201ENST00000429380 217 ntBASIC4.92□□□□□ -1.62
GPC1P35052 WARS2P1-201ENST00000429678 537 ntBASIC4.92□□□□□ -1.62
GPC1P35052 AL078601.1-201ENST00000444542 271 ntBASIC4.92□□□□□ -1.62
GPC1P35052 AL136038.1-201ENST00000497246 351 ntBASIC4.92□□□□□ -1.62
GPC1P35052 AC010265.1-201ENST00000513509 211 ntBASIC4.92□□□□□ -1.62
GPC1P35052 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.92□□□□□ -1.62
GPC1P35052 RN7SKP49-201ENST00000516675 260 ntBASIC4.92□□□□□ -1.62
GPC1P35052 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GPC1P35052 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.92□□□□□ -1.62
GPC1P35052 AC068831.7-201ENST00000616954 363 ntBASIC4.92□□□□□ -1.62
GPC1P35052 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.92□□□□□ -1.62
GPC1P35052 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.92□□□□□ -1.62
GPC1P35052 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GPC1P35052 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
GPC1P35052 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
GPC1P35052 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
GPC1P35052 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.92□□□□□ -1.62
GPC1P35052 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.92□□□□□ -1.62
GPC1P35052 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GPC1P35052 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GPC1P35052 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GPC1P35052 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
GPC1P35052 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.91□□□□□ -1.62
GPC1P35052 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
GPC1P35052 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GPC1P35052 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
GPC1P35052 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
GPC1P35052 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
GPC1P35052 SNORD115-32-201ENST00000364079 82 ntBASIC4.91□□□□□ -1.62
GPC1P35052 RNU6-173P-201ENST00000364215 104 ntBASIC4.91□□□□□ -1.62
GPC1P35052 Y_RNA.357-201ENST00000365487 109 ntBASIC4.91□□□□□ -1.62
GPC1P35052 RNU6-1286P-201ENST00000383871 107 ntBASIC4.91□□□□□ -1.62
GPC1P35052 SNORA67-201ENST00000384423 137 ntBASIC4.91□□□□□ -1.62
GPC1P35052 RNA5SP213-201ENST00000391031 106 ntBASIC4.91□□□□□ -1.62
GPC1P35052 RN7SKP229-201ENST00000410465 302 ntBASIC4.91□□□□□ -1.62
GPC1P35052 RNU6-1001P-201ENST00000411265 100 ntBASIC4.91□□□□□ -1.62
GPC1P35052 EIF4A1P3-201ENST00000411521 244 ntBASIC4.91□□□□□ -1.62
GPC1P35052 COX5BP7-201ENST00000414780 274 ntBASIC4.91□□□□□ -1.62
GPC1P35052 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.91□□□□□ -1.62
GPC1P35052 AC079355.1-201ENST00000421770 223 ntBASIC4.91□□□□□ -1.62
GPC1P35052 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.91□□□□□ -1.62
GPC1P35052 AC096638.1-201ENST00000444678 216 ntBASIC4.91□□□□□ -1.62
GPC1P35052 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.91□□□□□ -1.62
GPC1P35052 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.91□□□□□ -1.62
GPC1P35052 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.91□□□□□ -1.62
GPC1P35052 RPL23AP49-201ENST00000492925 468 ntBASIC4.91□□□□□ -1.62
GPC1P35052 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.91□□□□□ -1.62
GPC1P35052 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.91□□□□□ -1.62
GPC1P35052 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.91□□□□□ -1.62
GPC1P35052 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.91□□□□□ -1.62
GPC1P35052 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.91□□□□□ -1.62
GPC1P35052 AC040958.1-201ENST00000561102 201 ntBASIC4.91□□□□□ -1.62
GPC1P35052 MIR3936-201ENST00000584304 110 ntBASIC4.91□□□□□ -1.62
GPC1P35052 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
GPC1P35052 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms