Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 IFNA11P-201ENST00000446352 526 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 RNU7-26P-201ENST00000458980 63 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 AC090096.1-201ENST00000489168 390 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 AC108210.2-201ENST00000503681 201 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXA9P31269 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXA9P31269 AC022483.1-201ENST00000514020 567 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.33□□□□□ -2.04
HOXA9P31269 AP003467.2-201ENST00000520175 319 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 AMZ2P1-203ENST00000565833 850 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXA9P31269 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXA9P31269 MIR3616-201ENST00000584070 92 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.33□□□□□ -2.04
HOXA9P31269 AP000811.1-201ENST00000603803 651 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 AC103710.4-201ENST00000609301 899 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXA9P31269 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 AC009831.4-201ENST00000620744 325 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 AP000770.2-201ENST00000623694 100 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
HOXA9P31269 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXA9P31269 MTND4P16-201ENST00000466108 1367 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXA9P31269 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HOXA9P31269 RNU5E-8P-201ENST00000363502 116 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 RNU6-853P-201ENST00000364306 107 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 RNU6-660P-201ENST00000364566 109 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 RNU6-769P-201ENST00000384407 104 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXA9P31269 SNORA11.4-201ENST00000408823 129 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXA9P31269 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXA9P31269 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXA9P31269 PPP1R11P2-201ENST00000423543 382 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 MTCO3P30-201ENST00000426425 670 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXA9P31269 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.32□□□□□ -2.04
HOXA9P31269 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXA9P31269 AC233279.1-201ENST00000455300 423 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 RNU6-420P-201ENST00000458780 107 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 AL049714.1-201ENST00000466686 347 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 RPL31P60-201ENST00000478450 367 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 AC004263.1-201ENST00000479327 332 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.32□□□□□ -2.04
HOXA9P31269 SCARNA16.3-201ENST00000516595 184 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.32□□□□□ -2.04
HOXA9P31269 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXA9P31269 AC013828.2-201ENST00000532487 235 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.32□□□□□ -2.04
HOXA9P31269 AC007115.1-201ENST00000546853 234 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXA9P31269 MIR3921-201ENST00000577308 85 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXA9P31269 AL645944.1-201ENST00000603857 493 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HOXA9P31269 AC018638.7-201ENST00000605836 1114 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXA9P31269 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 MIR6130-201ENST00000619419 109 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 AC073308.1-201ENST00000623696 305 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 CU459211.1-201ENST00000635667 749 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXA9P31269 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXA9P31269 MTND5P33-201ENST00000571250 1450 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.32□□□□□ -2.04
HOXA9P31269 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
HOXA9P31269 AC009902.3-201ENST00000606235 2172 ntBASIC2.32□□□□□ -2.04
HOXA9P31269 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HOXA9P31269 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HOXA9P31269 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
HOXA9P31269 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
HOXA9P31269 AC002543.1-201ENST00000299783 1954 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 DEFB108F-201ENST00000344638 222 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 RNU6-1078P-201ENST00000364522 103 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 RNU6-76P-201ENST00000384060 104 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 MIR1305-201ENST00000408300 86 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 RN7SKP32-201ENST00000410167 303 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXA9P31269 CCDC58P2-201ENST00000417131 366 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXA9P31269 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXA9P31269 UBE2FP3-201ENST00000436366 524 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HOXA9P31269 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXA9P31269 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXA9P31269 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXA9P31269 RNU7-23P-201ENST00000459465 62 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 AC068587.2-201ENST00000478386 781 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HOXA9P31269 EIF4EP3-201ENST00000498782 656 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 AC022447.3-201ENST00000506865 495 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 BTF3P12-201ENST00000519620 469 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXA9P31269 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXA9P31269 ATP5F1P5-201ENST00000526403 760 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 DEFB108D-201ENST00000527787 222 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 AP004247.1-201ENST00000531556 1289 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms