Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF1P30408 AC012414.6-201ENST00000568241 401 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 AC073544.2-201ENST00000601155 540 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 AL158827.2-201ENST00000602494 330 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 AC087752.4-201ENST00000605911 462 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 AL161734.1-201ENST00000609720 557 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 AC109347.2-201ENST00000610220 349 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 AL161629.2-201ENST00000615347 275 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 AL691447.3-201ENST00000635020 330 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF1P30408 MTND5P29-201ENST00000458676 1807 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF1P30408 AC073343.1-201ENST00000328239 651 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 RNU5E-1-201ENST00000362477 120 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 RNU6-1167P-201ENST00000363227 94 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 SNORA20.2-201ENST00000383922 131 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 RNU6-140P-201ENST00000384566 108 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 RNA5SP252-201ENST00000391131 119 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 RNU2-36P-201ENST00000410361 191 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TM4SF1P30408 SETP8-201ENST00000435341 628 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 PGBD4P3-201ENST00000440731 581 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 AC010099.1-201ENST00000455434 375 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 snoU13.28-201ENST00000459235 104 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TM4SF1P30408 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
TM4SF1P30408 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.31□□□□□ -1.88
TM4SF1P30408 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.31□□□□□ -1.88
TM4SF1P30408 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.31□□□□□ -1.88
TM4SF1P30408 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.31□□□□□ -1.88
TM4SF1P30408 AC117532.1-201ENST00000514638 323 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 RNU6-928P-201ENST00000516876 104 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 RNU6-677P-201ENST00000516914 101 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 RNU6-143P-201ENST00000516942 93 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 ARL2BPP2-201ENST00000550907 489 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.31□□□□□ -1.88
TM4SF1P30408 AC135507.1-201ENST00000607214 561 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 AC010338.1-201ENST00000621823 717 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 CU459211.1-201ENST00000635667 749 ntBASIC3.31□□□□□ -1.88
TM4SF1P30408 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TM4SF1P30408 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TM4SF1P30408 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TM4SF1P30408 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TM4SF1P30408 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.3□□□□□ -1.88
TM4SF1P30408 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TM4SF1P30408 RNU6-217P-201ENST00000384164 104 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 RNU6-198P-201ENST00000384258 104 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 MIR518C-201ENST00000384822 101 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 MIR27B-201ENST00000385129 97 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 RPS3AP36-201ENST00000398190 775 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.3□□□□□ -1.88
TM4SF1P30408 RNA5SP293-201ENST00000410527 113 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 RNU4-53P-201ENST00000410828 140 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 RN7SKP192-201ENST00000411291 327 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.3□□□□□ -1.88
TM4SF1P30408 RPLP0P7-201ENST00000416050 667 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 RPL31P12-201ENST00000422587 358 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.3□□□□□ -1.88
TM4SF1P30408 MTATP6P30-201ENST00000443540 664 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.3□□□□□ -1.88
TM4SF1P30408 WASF1P1-201ENST00000447560 1131 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.3□□□□□ -1.88
TM4SF1P30408 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.3□□□□□ -1.88
TM4SF1P30408 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.3□□□□□ -1.88
TM4SF1P30408 AC138853.1-201ENST00000503549 823 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.3□□□□□ -1.88
TM4SF1P30408 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.3□□□□□ -1.88
TM4SF1P30408 SNORA18.6-201ENST00000516792 115 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.3□□□□□ -1.88
TM4SF1P30408 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.3□□□□□ -1.88
TM4SF1P30408 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.3□□□□□ -1.88
TM4SF1P30408 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.3□□□□□ -1.88
TM4SF1P30408 AC040904.1-201ENST00000590850 223 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 GLUD1P4-201ENST00000590914 418 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 AL136363.1-201ENST00000605349 337 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 AL451064.1-201ENST00000607718 471 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 AC103710.2-201ENST00000609912 942 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 MAPK10-362ENST00000641864 4484 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
TM4SF1P30408 AL353746.1-201ENST00000566293 6881 ntBASIC3.3□□□□□ -1.88
TM4SF1P30408 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TM4SF1P30408 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.29□□□□□ -1.88
TM4SF1P30408 TEX21P-201ENST00000447107 1476 ntBASIC3.29□□□□□ -1.88
TM4SF1P30408 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.29□□□□□ -1.88
TM4SF1P30408 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.29□□□□□ -1.88
TM4SF1P30408 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TM4SF1P30408 MIR148B-201ENST00000362252 99 ntBASIC3.29□□□□□ -1.88
TM4SF1P30408 RNU5E-6P-201ENST00000365574 115 ntBASIC3.29□□□□□ -1.88
TM4SF1P30408 RNU6-1027P-201ENST00000383998 107 ntBASIC3.29□□□□□ -1.88
TM4SF1P30408 SNORD116-1-201ENST00000384335 95 ntBASIC3.29□□□□□ -1.88
TM4SF1P30408 MIR181A2-201ENST00000384863 110 ntBASIC3.29□□□□□ -1.88
TM4SF1P30408 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TM4SF1P30408 RPL21P3-201ENST00000395517 478 ntBASIC3.29□□□□□ -1.88
TM4SF1P30408 AL513477.1-202ENST00000417061 214 ntBASIC3.29□□□□□ -1.88
TM4SF1P30408 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.29□□□□□ -1.88
TM4SF1P30408 MTND4P25-201ENST00000441039 533 ntBASIC3.29□□□□□ -1.88
TM4SF1P30408 AC146507.2-201ENST00000460608 476 ntBASIC3.29□□□□□ -1.88
TM4SF1P30408 RN7SL75P-201ENST00000461926 281 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms