Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 uc_338.14-201ENST00000613162 166 ntBASIC1.43□□□□□ -2.18
HLA-DMBP28068 MIR3199-2-201ENST00000636243 86 ntBASIC1.43□□□□□ -2.18
HLA-DMBP28068 CDR1-202ENST00000625883 1485 ntBASIC1.43□□□□□ -2.18
HLA-DMBP28068 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HLA-DMBP28068 AL356292.1-201ENST00000283110 373 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 MIR583-201ENST00000384846 75 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AL079342.2-201ENST00000403367 482 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 PTGES3P2-201ENST00000407942 482 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 RNU6-1140P-201ENST00000410517 106 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 RPL26P27-201ENST00000414397 437 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.42□□□□□ -2.18
HLA-DMBP28068 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DMBP28068 AL445685.2-201ENST00000422551 342 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 HMGN2P19-201ENST00000425149 265 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 ELOCP14-201ENST00000428070 331 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DMBP28068 ELOCP7-201ENST00000439968 331 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HLA-DMBP28068 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DMBP28068 snoU13.23-201ENST00000458863 104 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DMBP28068 RPL23AP41-201ENST00000484754 458 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC026801.1-201ENST00000497178 464 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC108210.2-201ENST00000503681 201 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DMBP28068 MRPS17P9-201ENST00000511924 393 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC027338.1-201ENST00000514840 825 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.42□□□□□ -2.18
HLA-DMBP28068 MTCO3P15-201ENST00000526563 574 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC090897.2-201ENST00000581715 130 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 MIR4765-201ENST00000585007 77 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC078899.2-201ENST00000595282 212 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC005261.5-201ENST00000596280 355 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AL139344.1-201ENST00000605228 195 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC004805.2-201ENST00000605382 482 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC009318.2-201ENST00000610917 651 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC009268.2-201ENST00000621925 457 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 AC109454.4-201ENST00000623411 649 ntBASIC1.42□□□□□ -2.18
HLA-DMBP28068 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 RNU6-486P-201ENST00000363116 107 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 SNORA16.1-201ENST00000364597 132 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AL590084.2-201ENST00000401481 382 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 MTND1P21-201ENST00000412991 285 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 SNORD56-201ENST00000413522 71 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 MTCYBP38-201ENST00000417160 1123 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 FABP5P14-201ENST00000437273 393 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 HMGN2P10-201ENST00000448085 265 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC013267.1-201ENST00000458227 267 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 HMGB1P28-201ENST00000507778 552 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 MTCYBP16-201ENST00000509187 1129 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 MRPS33P3-201ENST00000513456 322 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 RNA5SP290-201ENST00000517133 127 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 SLC2A13P1-201ENST00000531560 322 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC021739.1-201ENST00000559631 174 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 MIR4529-201ENST00000578110 78 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AL353997.4-201ENST00000586196 166 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC091152.3-201ENST00000604227 325 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC025754.2-201ENST00000606491 432 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC093673.2-201ENST00000609674 331 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC107075.1-201ENST00000613695 314 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC020658.4-201ENST00000613987 684 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC078880.5-201ENST00000617845 421 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC007490.1-201ENST00000624321 703 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC019226.1-201ENST00000625666 515 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DMBP28068 AC241585.2-209ENST00000638217 143 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 AL359854.1-201ENST00000614203 1594 ntBASIC1.41□□□□□ -2.18
HLA-DMBP28068 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HLA-DMBP28068 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.18
HLA-DMBP28068 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
HLA-DMBP28068 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 RNU6-236P-201ENST00000363886 106 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 U8.14-201ENST00000390843 143 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 TXNP7-201ENST00000406296 293 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 BX119904.4-201ENST00000424402 301 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 AIMP1P2-201ENST00000425294 312 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 UBE2D3P3-201ENST00000426992 425 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 MTND1P28-201ENST00000435623 950 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 MTND4P6-201ENST00000438297 472 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 FABP5P13-201ENST00000452144 328 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 RPL23AP3-201ENST00000453844 468 ntBASIC1.4□□□□□ -2.19
HLA-DMBP28068 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DMBP28068 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms