Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MTCO1P47-201ENST00000523889 1271 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 AP004247.1-201ENST00000531556 1289 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 AC013828.2-201ENST00000532487 235 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.81□□□□□ -2.12
COL8A2P25067 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.81□□□□□ -2.12
COL8A2P25067 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.81□□□□□ -2.12
COL8A2P25067 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.81□□□□□ -2.12
COL8A2P25067 LRRC37A5P-203ENST00000580181 585 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 AP001004.1-201ENST00000582468 324 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 AC097468.3-201ENST00000607956 456 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 AC002550.2-201ENST00000621246 394 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 AC073308.1-201ENST00000623696 305 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 AC068880.5-201ENST00000624331 290 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 AC019226.2-201ENST00000625973 424 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.81□□□□□ -2.12
COL8A2P25067 AP000553.5-201ENST00000641933 54 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 OR5H6-203ENST00000642105 978 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL8A2P25067 MTND4P16-201ENST00000466108 1367 ntBASIC1.81□□□□□ -2.12
COL8A2P25067 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
COL8A2P25067 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL8A2P25067 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.8□□□□□ -2.12
COL8A2P25067 RNU6-500P-201ENST00000362349 107 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 SNORD114-1-201ENST00000362705 72 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 Y_RNA.169-201ENST00000363745 96 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 RNU6-270P-201ENST00000364131 105 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 RNU6-660P-201ENST00000364566 109 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.8□□□□□ -2.12
COL8A2P25067 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.8□□□□□ -2.12
COL8A2P25067 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.8□□□□□ -2.12
COL8A2P25067 MTND1P23-201ENST00000416931 372 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.8□□□□□ -2.12
COL8A2P25067 AL365203.2-201ENST00000423444 196 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 BX119904.4-201ENST00000424402 301 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL8A2P25067 RSU1P2-202ENST00000437884 485 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AC009237.8-201ENST00000445492 379 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.8□□□□□ -2.12
COL8A2P25067 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.8□□□□□ -2.12
COL8A2P25067 SNORD121B-201ENST00000458838 81 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 MTND4LP3-201ENST00000468320 276 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 RPL30P6-201ENST00000475925 342 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 RPL23AP70-201ENST00000483361 460 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AC090096.1-201ENST00000489168 390 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.8□□□□□ -2.12
COL8A2P25067 RPF2P2-201ENST00000504693 896 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AC010486.2-201ENST00000505572 483 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 HMGB3P3-201ENST00000510526 400 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 TTC39CP1-201ENST00000512513 755 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.8□□□□□ -2.12
COL8A2P25067 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.8□□□□□ -2.12
COL8A2P25067 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.8□□□□□ -2.12
COL8A2P25067 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.8□□□□□ -2.12
COL8A2P25067 AC012435.1-202ENST00000568772 240 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.8□□□□□ -2.12
COL8A2P25067 AL136363.1-201ENST00000605349 337 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AC103710.4-201ENST00000609301 899 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AL450472.3-201ENST00000615578 367 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AC010378.1-201ENST00000619270 362 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.8□□□□□ -2.12
COL8A2P25067 AL603755.1-201ENST00000619504 163 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AC008443.7-201ENST00000622195 246 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AP000676.3-201ENST00000623299 569 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.8□□□□□ -2.12
COL8A2P25067 PCMTD1P7-201ENST00000634506 357 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 AC110994.2-201ENST00000635481 492 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.8□□□□□ -2.12
COL8A2P25067 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL8A2P25067 AC131280.1-202ENST00000624067 4211 ntBASIC1.8□□□□□ -2.12
COL8A2P25067 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL8A2P25067 RNU6-553P-201ENST00000364047 96 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 RNU6-1078P-201ENST00000364522 103 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 U3.20-201ENST00000390909 217 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 SNORA48.3-201ENST00000391081 134 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.79□□□□□ -2.12
COL8A2P25067 MIR1289-2-201ENST00000408360 111 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.79□□□□□ -2.12
COL8A2P25067 MORF4L1P6-201ENST00000418771 268 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.79□□□□□ -2.12
COL8A2P25067 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.79□□□□□ -2.12
COL8A2P25067 AL512844.2-201ENST00000433990 593 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 UBE2V1P13-201ENST00000436983 439 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 DDX3P2-201ENST00000446138 111 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.79□□□□□ -2.12
COL8A2P25067 WASF1P1-201ENST00000447560 1131 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 AL118520.1-201ENST00000450770 291 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.79□□□□□ -2.12
COL8A2P25067 MTND1P9-201ENST00000453775 944 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.79□□□□□ -2.12
COL8A2P25067 AC005178.1-201ENST00000508392 440 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.79□□□□□ -2.12
COL8A2P25067 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.79□□□□□ -2.12
COL8A2P25067 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.79□□□□□ -2.12
COL8A2P25067 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.79□□□□□ -2.12
COL8A2P25067 AC022483.1-201ENST00000514020 567 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.79□□□□□ -2.12
COL8A2P25067 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.79□□□□□ -2.12
COL8A2P25067 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.79□□□□□ -2.12
COL8A2P25067 AP003497.1-201ENST00000528472 562 ntBASIC1.79□□□□□ -2.12
COL8A2P25067 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms