Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RPS20P22-201ENST00000473700 357 ntBASIC6.31□□□□□ -1.4
CD44P16070 SCARNA23-201ENST00000516060 130 ntBASIC6.31□□□□□ -1.4
CD44P16070 Y_RNA.667-201ENST00000516212 107 ntBASIC6.31□□□□□ -1.4
CD44P16070 RNU6-113P-201ENST00000516653 101 ntBASIC6.31□□□□□ -1.4
CD44P16070 IGLV3-24-201ENST00000517477 197 ntBASIC6.31□□□□□ -1.4
CD44P16070 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC6.31□□□□□ -1.4
CD44P16070 MIR3154-201ENST00000577829 84 ntBASIC6.31□□□□□ -1.4
CD44P16070 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.31□□□□□ -1.4
CD44P16070 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC6.31□□□□□ -1.4
CD44P16070 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
CD44P16070 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.31□□□□□ -1.4
CD44P16070 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.31□□□□□ -1.4
CD44P16070 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC6.31□□□□□ -1.4
CD44P16070 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD44P16070 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD44P16070 AC083899.1-201ENST00000454465 3819 ntBASIC6.31□□□□□ -1.4
CD44P16070 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.31□□□□□ -1.4
CD44P16070 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD44P16070 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CD44P16070 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD44P16070 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CD44P16070 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD44P16070 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CD44P16070 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CD44P16070 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD44P16070 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.3□□□□□ -1.4
CD44P16070 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.3□□□□□ -1.4
CD44P16070 Y_RNA.91-201ENST00000363042 107 ntBASIC6.3□□□□□ -1.4
CD44P16070 MIR320B2-201ENST00000408479 138 ntBASIC6.3□□□□□ -1.4
CD44P16070 AC017078.1-201ENST00000416146 368 ntBASIC6.3□□□□□ -1.4
CD44P16070 AC119751.6-201ENST00000416712 186 ntBASIC6.3□□□□□ -1.4
CD44P16070 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC6.3□□□□□ -1.4
CD44P16070 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.3□□□□□ -1.4
CD44P16070 EIF4A2P5-201ENST00000529914 499 ntBASIC6.3□□□□□ -1.4
CD44P16070 AC021006.3-201ENST00000530771 192 ntBASIC6.3□□□□□ -1.4
CD44P16070 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.3□□□□□ -1.4
CD44P16070 MIR6806-201ENST00000622141 64 ntBASIC6.3□□□□□ -1.4
CD44P16070 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CD44P16070 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD44P16070 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.3□□□□□ -1.4
CD44P16070 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD44P16070 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC6.3□□□□□ -1.4
CD44P16070 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.3□□□□□ -1.4
CD44P16070 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CD44P16070 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.29□□□□□ -1.4
CD44P16070 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD44P16070 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CD44P16070 SNORD56.1-201ENST00000362913 68 ntBASIC6.29□□□□□ -1.4
CD44P16070 RN7SKP145-201ENST00000363291 303 ntBASIC6.29□□□□□ -1.4
CD44P16070 SNORD115-13-201ENST00000363358 82 ntBASIC6.29□□□□□ -1.4
CD44P16070 SNORD115-16-201ENST00000363887 82 ntBASIC6.29□□□□□ -1.4
CD44P16070 SNORD115-1-201ENST00000364961 82 ntBASIC6.29□□□□□ -1.4
CD44P16070 Y_RNA.366-201ENST00000365540 102 ntBASIC6.29□□□□□ -1.4
CD44P16070 MIR544A-201ENST00000384855 91 ntBASIC6.29□□□□□ -1.4
CD44P16070 AC007064.1-201ENST00000412238 351 ntBASIC6.29□□□□□ -1.4
CD44P16070 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.29□□□□□ -1.4
CD44P16070 Z85995.1-201ENST00000415547 335 ntBASIC6.29□□□□□ -1.4
CD44P16070 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.29□□□□□ -1.4
CD44P16070 AC068228.1-201ENST00000461723 211 ntBASIC6.29□□□□□ -1.4
CD44P16070 AL122020.1-201ENST00000472287 459 ntBASIC6.29□□□□□ -1.4
CD44P16070 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.29□□□□□ -1.4
CD44P16070 AC018442.3-201ENST00000523025 183 ntBASIC6.29□□□□□ -1.4
CD44P16070 HMGN2P36-201ENST00000529541 409 ntBASIC6.29□□□□□ -1.4
CD44P16070 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CD44P16070 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CD44P16070 AL359091.2-201ENST00000609303 556 ntBASIC6.29□□□□□ -1.4
CD44P16070 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.29□□□□□ -1.4
CD44P16070 MIR6889-201ENST00000613185 59 ntBASIC6.29□□□□□ -1.4
CD44P16070 MIR6133-201ENST00000617057 108 ntBASIC6.29□□□□□ -1.4
CD44P16070 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CD44P16070 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
CD44P16070 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD44P16070 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CD44P16070 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD44P16070 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.29□□□□□ -1.4
CD44P16070 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.28□□□□□ -1.4
CD44P16070 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
CD44P16070 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD44P16070 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD44P16070 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD44P16070 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CD44P16070 AC092681.1-201ENST00000297369 291 ntBASIC6.28□□□□□ -1.4
CD44P16070 RPL23P2-201ENST00000320371 421 ntBASIC6.28□□□□□ -1.4
CD44P16070 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.28□□□□□ -1.4
CD44P16070 RNU6-414P-201ENST00000363705 104 ntBASIC6.28□□□□□ -1.4
CD44P16070 Y_RNA.634-201ENST00000364811 113 ntBASIC6.28□□□□□ -1.4
CD44P16070 RNU6-418P-201ENST00000384035 107 ntBASIC6.28□□□□□ -1.4
CD44P16070 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CD44P16070 SNORA26.3-201ENST00000391119 136 ntBASIC6.28□□□□□ -1.4
CD44P16070 CYCSP10-201ENST00000417973 294 ntBASIC6.28□□□□□ -1.4
CD44P16070 RNA5SP57-201ENST00000459463 123 ntBASIC6.28□□□□□ -1.4
CD44P16070 SNORD125-201ENST00000459538 96 ntBASIC6.28□□□□□ -1.4
CD44P16070 RPS23P2-201ENST00000463671 415 ntBASIC6.28□□□□□ -1.4
CD44P16070 RPS17P15-201ENST00000475609 349 ntBASIC6.28□□□□□ -1.4
CD44P16070 AC021678.3-201ENST00000517893 476 ntBASIC6.28□□□□□ -1.4
CD44P16070 AC011471.1-201ENST00000585766 187 ntBASIC6.28□□□□□ -1.4
CD44P16070 AP003357.1-201ENST00000604497 148 ntBASIC6.28□□□□□ -1.4
CD44P16070 AC019159.1-201ENST00000605094 187 ntBASIC6.28□□□□□ -1.4
CD44P16070 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.28□□□□□ -1.4
CD44P16070 5S_rRNA.13-201ENST00000622298 123 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms