Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 FCF1P8-201ENST00000510322 597 ntBASIC3.26□□□□□ -1.89
PCNAP12004 RNU6-677P-201ENST00000516914 101 ntBASIC3.26□□□□□ -1.89
PCNAP12004 RNA5SP503-201ENST00000517047 117 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.26□□□□□ -1.89
PCNAP12004 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.26□□□□□ -1.89
PCNAP12004 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.26□□□□□ -1.89
PCNAP12004 AC092325.1-201ENST00000566449 554 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.26□□□□□ -1.89
PCNAP12004 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.26□□□□□ -1.89
PCNAP12004 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
PCNAP12004 AC078899.3-201ENST00000599065 212 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AL161798.1-201ENST00000604630 131 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.26□□□□□ -1.89
PCNAP12004 AC010338.1-201ENST00000621823 717 ntBASIC3.26□□□□□ -1.89
PCNAP12004 U6.114-201ENST00000636407 96 ntBASIC3.26□□□□□ -1.89
PCNAP12004 MTND1P37-201ENST00000636562 264 ntBASIC3.26□□□□□ -1.89
PCNAP12004 ZNF807-201ENST00000328088 1707 ntBASIC3.26□□□□□ -1.89
PCNAP12004 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCNAP12004 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCNAP12004 AC006020.1-201ENST00000420179 1854 ntBASIC3.26□□□□□ -1.89
PCNAP12004 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.26□□□□□ -1.89
PCNAP12004 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCNAP12004 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCNAP12004 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PCNAP12004 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.25□□□□□ -1.89
PCNAP12004 AC007785.2-201ENST00000598627 1916 ntBASIC3.25□□□□□ -1.89
PCNAP12004 RNU6-996P-201ENST00000365438 107 ntBASIC3.25□□□□□ -1.89
PCNAP12004 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.25□□□□□ -1.89
PCNAP12004 SNORA69-201ENST00000383895 132 ntBASIC3.25□□□□□ -1.89
PCNAP12004 MIR200C-201ENST00000384980 68 ntBASIC3.25□□□□□ -1.89
PCNAP12004 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCNAP12004 CISD1P1-201ENST00000393907 327 ntBASIC3.25□□□□□ -1.89
PCNAP12004 PTMAP2-201ENST00000397627 327 ntBASIC3.25□□□□□ -1.89
PCNAP12004 RNU2-33P-201ENST00000410344 192 ntBASIC3.25□□□□□ -1.89
PCNAP12004 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.25□□□□□ -1.89
PCNAP12004 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.25□□□□□ -1.89
PCNAP12004 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.25□□□□□ -1.89
PCNAP12004 AC091286.1-201ENST00000431233 461 ntBASIC3.25□□□□□ -1.89
PCNAP12004 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.25□□□□□ -1.89
PCNAP12004 HMGN2P31-201ENST00000432430 273 ntBASIC3.25□□□□□ -1.89
PCNAP12004 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.25□□□□□ -1.89
PCNAP12004 RPL36AP6-201ENST00000435770 321 ntBASIC3.25□□□□□ -1.89
PCNAP12004 DDX3P2-201ENST00000446138 111 ntBASIC3.25□□□□□ -1.89
PCNAP12004 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.25□□□□□ -1.89
PCNAP12004 AL356010.1-201ENST00000456364 102 ntBASIC3.25□□□□□ -1.89
PCNAP12004 AC083798.1-201ENST00000472671 131 ntBASIC3.25□□□□□ -1.89
PCNAP12004 RPL36AP51-201ENST00000487216 318 ntBASIC3.25□□□□□ -1.89
PCNAP12004 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.25□□□□□ -1.89
PCNAP12004 APOOP4-201ENST00000513530 597 ntBASIC3.25□□□□□ -1.89
PCNAP12004 RNA5SP401-201ENST00000515920 127 ntBASIC3.25□□□□□ -1.89
PCNAP12004 RNU6-835P-201ENST00000516974 104 ntBASIC3.25□□□□□ -1.89
PCNAP12004 SNORA31.26-201ENST00000517250 137 ntBASIC3.25□□□□□ -1.89
PCNAP12004 MTND1P35-201ENST00000526739 508 ntBASIC3.25□□□□□ -1.89
PCNAP12004 AP005435.4-201ENST00000529514 284 ntBASIC3.25□□□□□ -1.89
PCNAP12004 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.25□□□□□ -1.89
PCNAP12004 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.25□□□□□ -1.89
PCNAP12004 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.25□□□□□ -1.89
PCNAP12004 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.25□□□□□ -1.89
PCNAP12004 MIR4703-201ENST00000577728 79 ntBASIC3.25□□□□□ -1.89
PCNAP12004 AC015917.1-201ENST00000579654 510 ntBASIC3.25□□□□□ -1.89
PCNAP12004 MIR4506-201ENST00000584693 77 ntBASIC3.25□□□□□ -1.89
PCNAP12004 BNIP3P30-201ENST00000601184 574 ntBASIC3.25□□□□□ -1.89
PCNAP12004 AL670379.4-201ENST00000605279 254 ntBASIC3.25□□□□□ -1.89
PCNAP12004 U3.45-201ENST00000607547 219 ntBASIC3.25□□□□□ -1.89
PCNAP12004 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCNAP12004 AC090617.7-201ENST00000623952 126 ntBASIC3.25□□□□□ -1.89
PCNAP12004 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.25□□□□□ -1.89
PCNAP12004 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.25□□□□□ -1.89
PCNAP12004 MIR1321-201ENST00000637766 79 ntBASIC3.25□□□□□ -1.89
PCNAP12004 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCNAP12004 AC017071.1-201ENST00000564407 2204 ntBASIC3.25□□□□□ -1.89
PCNAP12004 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
PCNAP12004 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCNAP12004 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCNAP12004 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.24□□□□□ -1.89
PCNAP12004 RNY4P14-201ENST00000363656 96 ntBASIC3.24□□□□□ -1.89
PCNAP12004 RNU6-741P-201ENST00000383889 107 ntBASIC3.24□□□□□ -1.89
PCNAP12004 Y_RNA.453-201ENST00000384223 109 ntBASIC3.24□□□□□ -1.89
PCNAP12004 RNU6-817P-201ENST00000391083 104 ntBASIC3.24□□□□□ -1.89
PCNAP12004 AL139039.1-201ENST00000401900 692 ntBASIC3.24□□□□□ -1.89
PCNAP12004 MTND1P23-201ENST00000416931 372 ntBASIC3.24□□□□□ -1.89
PCNAP12004 ATG3P1-201ENST00000419507 911 ntBASIC3.24□□□□□ -1.89
PCNAP12004 AL109913.1-201ENST00000421173 514 ntBASIC3.24□□□□□ -1.89
PCNAP12004 AC092017.2-201ENST00000427600 362 ntBASIC3.24□□□□□ -1.89
PCNAP12004 AL590383.1-201ENST00000428602 75 ntBASIC3.24□□□□□ -1.89
PCNAP12004 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.24□□□□□ -1.89
PCNAP12004 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.24□□□□□ -1.89
PCNAP12004 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.24□□□□□ -1.89
PCNAP12004 RPS24P13-201ENST00000442520 397 ntBASIC3.24□□□□□ -1.89
PCNAP12004 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.24□□□□□ -1.89
PCNAP12004 AC073415.1-201ENST00000449240 153 ntBASIC3.24□□□□□ -1.89
PCNAP12004 AC021205.2-201ENST00000480069 347 ntBASIC3.24□□□□□ -1.89
PCNAP12004 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.24□□□□□ -1.89
PCNAP12004 FAM92A1P2-202ENST00000504766 877 ntBASIC3.24□□□□□ -1.89
PCNAP12004 SNORA31.1-201ENST00000515993 133 ntBASIC3.24□□□□□ -1.89
PCNAP12004 SNORA31.5-201ENST00000516190 133 ntBASIC3.24□□□□□ -1.89
PCNAP12004 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
PCNAP12004 RN7SKP219-201ENST00000516825 296 ntBASIC3.24□□□□□ -1.89
PCNAP12004 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.24□□□□□ -1.89
PCNAP12004 IGKV2-26-201ENST00000518305 343 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms