| STAG3L3 | P0CL85 | ZNF280D-204 | ENST00000558320 | 3666 nt | TSL 1 (best) BASIC | 1.92 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | SNORD62.1-201 | ENST00000362541 | 86 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | SNORA62.3-201 | ENST00000365110 | 153 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | CXorf65-201 | ENST00000374251 | 601 nt | APPRIS P1 TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | CRLS1-202 | ENST00000378868 | 994 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AL356432.1-201 | ENST00000405809 | 419 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AC104777.3-201 | ENST00000416350 | 545 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AC093423.2-201 | ENST00000429074 | 437 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | WARS2P1-201 | ENST00000429678 | 537 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AL139237.2-201 | ENST00000438454 | 493 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AC007003.1-202 | ENST00000439318 | 349 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AC091153.2-202 | ENST00000441700 | 384 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | CHODL-AS1-201 | ENST00000447175 | 1117 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AL359915.2-203 | ENST00000457043 | 540 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | LINC01038-201 | ENST00000457858 | 428 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | RPL39P36-201 | ENST00000490784 | 156 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AC021146.8-201 | ENST00000507455 | 733 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AC018752.1-201 | ENST00000507813 | 206 nt | TSL 5 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AC010376.1-201 | ENST00000522101 | 334 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AP006587.4-201 | ENST00000526053 | 529 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | DEFB108A-201 | ENST00000530110 | 222 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AP003498.1-201 | ENST00000532530 | 347 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AC025575.1-201 | ENST00000548497 | 544 nt | TSL 4 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | RPS3AP4-201 | ENST00000555161 | 764 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AC012378.1-201 | ENST00000561155 | 364 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | MIR4448-201 | ENST00000584360 | 86 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AL670379.10-201 | ENST00000604330 | 253 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AL670379.9-201 | ENST00000605428 | 253 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AL773524.1-201 | ENST00000614065 | 229 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | OR5H6-201 | ENST00000615035 | 1113 nt | APPRIS P1 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | ATP5A1P2-202 | ENST00000616464 | 443 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | U4.3-201 | ENST00000621047 | 82 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AC012150.2-201 | ENST00000621300 | 544 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | C17orf112-201 | ENST00000623702 | 835 nt | TSL 2 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | AL136313.1-201 | ENST00000624804 | 202 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | NF1-214 | ENST00000490416 | 1329 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | SYT14-201 | ENST00000367015 | 5094 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.9 | □□□□□ -2.1 | | |
| STAG3L3 | P0CL85 | DLEU2_6.3-201 | ENST00000340052 | 136 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | MIRLET7G-201 | ENST00000362280 | 84 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RNU5E-1-201 | ENST00000362477 | 120 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RNA5SP72-201 | ENST00000364442 | 117 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RNU1-51P-201 | ENST00000365345 | 176 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | MIR518A2-201 | ENST00000384966 | 87 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RNU6-817P-201 | ENST00000391083 | 104 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | CASP3-203 | ENST00000393588 | 677 nt | TSL 4 BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | STAP1-202 | ENST00000396225 | 1146 nt | APPRIS P1 TSL 1 (best) BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC005162.2-201 | ENST00000411479 | 578 nt | TSL 4 BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC012370.1-201 | ENST00000419244 | 530 nt | TSL 3 BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | NUP35P1-201 | ENST00000422734 | 947 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RPL35AP12-201 | ENST00000425362 | 338 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AL592045.1-201 | ENST00000429867 | 352 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC093019.2-201 | ENST00000432294 | 384 nt | TSL 3 BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | KATNBL1P6-201 | ENST00000453433 | 915 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | BTF3P15-201 | ENST00000455606 | 336 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC108059.3-201 | ENST00000456388 | 214 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC055855.1-201 | ENST00000489563 | 579 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC104629.1-201 | ENST00000494226 | 508 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | HTN1-204 | ENST00000511674 | 623 nt | APPRIS P1 TSL 2 BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RNU6ATAC9P-201 | ENST00000516210 | 116 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RNU6-678P-201 | ENST00000516832 | 109 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | CD44-AS1-201 | ENST00000528869 | 587 nt | TSL 4 BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RANP3-201 | ENST00000530970 | 276 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC079600.2-201 | ENST00000550076 | 130 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | MMP2-AS1-201 | ENST00000565307 | 593 nt | TSL 4 BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC079411.1-201 | ENST00000565441 | 795 nt | TSL 1 (best) BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | MIR4697-201 | ENST00000582977 | 78 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC096772.1-201 | ENST00000609146 | 564 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | DLEU2_6.2-201 | ENST00000620994 | 136 nt | BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | MANEA-201 | ENST00000358812 | 4575 nt | APPRIS P1 TSL 1 (best) BASIC | 1.9 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC092125.1-201 | ENST00000562568 | 1995 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | OR6C76-201 | ENST00000328314 | 939 nt | APPRIS P1 BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RNU5A-8P-201 | ENST00000364102 | 114 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | SNORD114-30-201 | ENST00000364448 | 72 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | CD80-202 | ENST00000383669 | 771 nt | TSL 1 (best) BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AF241725.1-201 | ENST00000416182 | 480 nt | TSL 3 BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | U51244.1-201 | ENST00000423120 | 374 nt | TSL 3 BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AL512649.1-201 | ENST00000428997 | 581 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AL449983.1-201 | ENST00000430640 | 414 nt | TSL 2 BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | LAMTOR3P2-201 | ENST00000504479 | 232 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC113383.1-204 | ENST00000507060 | 552 nt | TSL 3 BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC008413.1-201 | ENST00000511864 | 177 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RNU6-572P-201 | ENST00000516724 | 80 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RNU6-467P-201 | ENST00000517027 | 110 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC018541.1-202 | ENST00000518687 | 584 nt | TSL 4 BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC025755.1-201 | ENST00000521306 | 278 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AP003122.3-201 | ENST00000526316 | 255 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC015771.1-201 | ENST00000527283 | 554 nt | TSL 4 BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC084851.1-201 | ENST00000529105 | 249 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | NDUFA5P6-201 | ENST00000542110 | 379 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | TTN-AS1-213 | ENST00000584485 | 838 nt | TSL 3 BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | BNIP3P27-201 | ENST00000599991 | 412 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC067747.1-201 | ENST00000608026 | 250 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC099654.8-201 | ENST00000637757 | 681 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | MLIP-AS1-201 | ENST00000434196 | 1534 nt | TSL 2 BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | ZNF720P1-201 | ENST00000562403 | 1939 nt | BASIC | 1.89 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | AC009487.4-201 | ENST00000624969 | 3585 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | LINC01684-201 | ENST00000415182 | 2176 nt | TSL 1 (best) BASIC | 1.88 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RNU6-288P-201 | ENST00000363690 | 104 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RNU1-140P-201 | ENST00000365040 | 165 nt | BASIC | 1.88 | □□□□□ -2.11 | | |
| STAG3L3 | P0CL85 | RNU6-898P-201 | ENST00000365627 | 104 nt | BASIC | 1.88 | □□□□□ -2.11 | | |