Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNA5SP492-201ENST00000411330 114 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A2P08572 AL365496.1-201ENST00000426885 215 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 RPL7L1P10-201ENST00000427790 463 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.55□□□□□ -2.16
COL4A2P08572 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.55□□□□□ -2.16
COL4A2P08572 AC090774.1-201ENST00000435925 246 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 RPL35AP22-201ENST00000436855 335 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 LSM1P1-201ENST00000438629 273 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 MTCO2P25-201ENST00000447065 681 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 ARPC3P5-201ENST00000448802 534 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 MTND1P9-201ENST00000453775 944 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.55□□□□□ -2.16
COL4A2P08572 snoU13.8-201ENST00000458890 104 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 AC114981.1-201ENST00000503897 678 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 AC113420.1-201ENST00000507903 571 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 AC113347.3-201ENST00000509113 148 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.55□□□□□ -2.16
COL4A2P08572 DEFB131D-201ENST00000526803 184 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.55□□□□□ -2.16
COL4A2P08572 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A2P08572 AC012493.3-201ENST00000604494 112 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 AC068880.5-201ENST00000624331 290 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A2P08572 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.55□□□□□ -2.16
COL4A2P08572 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.55□□□□□ -2.16
COL4A2P08572 AC099654.7-201ENST00000635788 2127 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 MTND5P35-201ENST00000557537 1720 ntBASIC1.55□□□□□ -2.16
COL4A2P08572 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.54□□□□□ -2.16
COL4A2P08572 U8.1-201ENST00000362843 134 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 SNORD56.5-201ENST00000364281 72 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 Y_RNA.311-201ENST00000365068 96 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 Y_RNA.408-201ENST00000383987 102 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 FO393413.1-201ENST00000402892 195 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 HMGB1P17-201ENST00000403495 628 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 RNU6-193P-201ENST00000410977 107 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A2P08572 AL139421.1-201ENST00000423010 169 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A2P08572 AC008850.1-201ENST00000427546 362 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 RPS29P29-201ENST00000456396 171 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A2P08572 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A2P08572 RNU6-276P-201ENST00000516114 96 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 SNORA19.3-201ENST00000516165 130 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A2P08572 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A2P08572 BBIP1P1-201ENST00000602999 279 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 AL136363.1-201ENST00000605349 337 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 MIR6504-201ENST00000613520 61 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
COL4A2P08572 AL138955.1-201ENST00000622881 1040 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 AC019226.1-201ENST00000625666 515 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A2P08572 OR5H6-203ENST00000642105 978 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL4A2P08572 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
COL4A2P08572 Y_RNA.191-201ENST00000363972 113 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 RNU4-51P-201ENST00000364206 140 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.54□□□□□ -2.16
COL4A2P08572 USP9YP6-201ENST00000413550 854 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 Z75741.2-201ENST00000417272 1167 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A2P08572 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A2P08572 GTF2IP3-201ENST00000433887 494 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A2P08572 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A2P08572 RPL23AP41-201ENST00000484754 458 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.54□□□□□ -2.16
COL4A2P08572 RPL21P131-201ENST00000497298 483 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 AC008837.2-201ENST00000513076 418 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 AC087373.1-201ENST00000524920 491 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.54□□□□□ -2.16
COL4A2P08572 BNIP3P27-201ENST00000599991 412 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 DUXAP4-201ENST00000603046 613 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.54□□□□□ -2.16
COL4A2P08572 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.54□□□□□ -2.16
COL4A2P08572 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.54□□□□□ -2.16
COL4A2P08572 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
COL4A2P08572 AC068700.1-201ENST00000565862 3754 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.54□□□□□ -2.16
COL4A2P08572 ZNF519P1-201ENST00000449011 1626 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 AC233981.2-201ENST00000611524 1614 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 RNU6-223P-201ENST00000362830 107 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 RNY1P14-201ENST00000384426 108 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 RNU6-1035P-201ENST00000384477 107 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 RPL23AP29-201ENST00000397284 453 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 DHFRP6-201ENST00000401776 268 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.53□□□□□ -2.16
COL4A2P08572 AL356320.2-201ENST00000417263 507 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.53□□□□□ -2.16
COL4A2P08572 HMGN2P19-201ENST00000425149 265 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 UBE2V1P13-201ENST00000436983 439 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.53□□□□□ -2.16
COL4A2P08572 AC007327.1-201ENST00000447461 264 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.53□□□□□ -2.16
COL4A2P08572 RNU7-136P-201ENST00000458819 69 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 MTND4LP3-201ENST00000468320 276 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms