Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC012254.4-201ENST00000588843 273 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 Pinc.1-201ENST00000616452 154 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 AC006963.1-201ENST00000624003 1052 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.68□□□□□ -2.3
SPTA1P02549 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SPTA1P02549 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SPTA1P02549 Y_RNA.170-201ENST00000363746 110 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 RNA5SP125-201ENST00000364843 120 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 RNU4-65P-201ENST00000410473 140 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 AC079780.1-201ENST00000428259 207 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 AL500527.1-201ENST00000448532 255 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 NF1P3-201ENST00000457709 450 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 AC133963.2-201ENST00000513686 578 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.68□□□□□ -2.3
SPTA1P02549 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.68□□□□□ -2.3
SPTA1P02549 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.68□□□□□ -2.3
SPTA1P02549 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.68□□□□□ -2.3
SPTA1P02549 AC010620.1-201ENST00000601088 1102 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 AL390862.1-201ENST00000635467 1469 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SPTA1P02549 SNORD114-15-201ENST00000364687 72 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 MIR518A2-201ENST00000384966 87 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SPTA1P02549 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.67□□□□□ -2.3
SPTA1P02549 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.67□□□□□ -2.3
SPTA1P02549 AC078857.1-201ENST00000469870 667 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 KLRA1P-201ENST00000503499 986 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 COL6A4P2-205ENST00000509855 506 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.67□□□□□ -2.3
SPTA1P02549 MTCYBP41-201ENST00000528913 1123 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 EIF4A1P12-201ENST00000551910 141 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.67□□□□□ -2.3
SPTA1P02549 AL109918.3-201ENST00000603072 338 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 AC013244.3-201ENST00000605614 388 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 SDR42E1P2-201ENST00000614861 481 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 SDR42E1P4-201ENST00000620894 481 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 MIR5087-201ENST00000635826 76 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 SNORA23-201ENST00000365128 182 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 RNU6-532P-201ENST00000384318 107 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 RNU6-1072P-201ENST00000384703 107 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 RNU6-443P-201ENST00000384780 107 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 FTH1P15-201ENST00000406984 280 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.67□□□□□ -2.3
SPTA1P02549 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.67□□□□□ -2.3
SPTA1P02549 HSPE1P24-201ENST00000450782 238 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 OR6C72P-201ENST00000451403 892 ntBASIC0.67□□□□□ -2.3
SPTA1P02549 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SPTA1P02549 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
SPTA1P02549 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 RNA5SP25-201ENST00000410815 110 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 RNU2-41P-201ENST00000410991 178 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 NUP35P2-201ENST00000416748 943 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.66□□□□□ -2.3
SPTA1P02549 VN1R81P-201ENST00000602085 372 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 AC055764.2-201ENST00000610089 670 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.66□□□□□ -2.3
SPTA1P02549 AC073592.7-201ENST00000623659 507 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.66□□□□□ -2.3
SPTA1P02549 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
SPTA1P02549 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SPTA1P02549 MIR329-1-201ENST00000385028 80 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.66□□□□□ -2.3
SPTA1P02549 AL356320.2-201ENST00000417263 507 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 AL357134.1-201ENST00000445848 426 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.66□□□□□ -2.3
SPTA1P02549 AC098862.1-201ENST00000504991 413 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 RNU6-758P-201ENST00000516292 89 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 ERHP1-201ENST00000523006 310 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 AL133370.2-201ENST00000619934 439 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 AC243829.3-201ENST00000622177 108 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
SPTA1P02549 AL442644.1-201ENST00000454390 3105 ntBASIC0.66□□□□□ -2.3
SPTA1P02549 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
SPTA1P02549 CBX3P1-201ENST00000325243 554 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 MIR126-201ENST00000362291 85 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 SNORA63.3-201ENST00000362682 132 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 RNA5SP391-201ENST00000363456 119 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 AC023347.2-201ENST00000433994 462 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
SPTA1P02549 RNA5SP471-201ENST00000516971 106 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 RNU2-19P-201ENST00000517288 84 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.65□□□□□ -2.31
SPTA1P02549 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.65□□□□□ -2.31
SPTA1P02549 CENPUP2-201ENST00000555897 1186 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.65□□□□□ -2.31
SPTA1P02549 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.65□□□□□ -2.31
SPTA1P02549 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.65□□□□□ -2.31
SPTA1P02549 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
SPTA1P02549 RPL21P32-201ENST00000419877 477 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 RPL7P30-201ENST00000420888 709 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.65□□□□□ -2.31
SPTA1P02549 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.65□□□□□ -2.31
SPTA1P02549 PCNAP1-201ENST00000505363 709 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 AL160236.1-201ENST00000556317 195 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.65□□□□□ -2.31
SPTA1P02549 AC023932.2-201ENST00000603176 175 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 AC006213.5-201ENST00000619673 288 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 AL118508.4-201ENST00000624142 1176 ntBASIC0.65□□□□□ -2.31
SPTA1P02549 FAM157B-203ENST00000639350 358 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms